Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 CCT4P2-201ENST00000233836 1548 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AL158163.1-201ENST00000603915 1649 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 GNG5P1-201ENST00000255500 204 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AL161781.1-201ENST00000354277 403 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 MIR331-201ENST00000362302 94 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 RNU6-28P-201ENST00000362378 107 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 Y_RNA.88-201ENST00000363029 99 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 RNU6-1243P-201ENST00000364028 107 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 RNU6-853P-201ENST00000364306 107 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 RNY3P14-201ENST00000384309 102 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 RPS20P2-201ENST00000402520 389 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 CIR1P3-201ENST00000405137 479 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 RNU2-8P-201ENST00000410727 190 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AC093578.1-201ENST00000415219 368 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 NUP35P2-201ENST00000416748 943 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 TIMM9P3-201ENST00000428659 274 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AL445584.1-201ENST00000431451 330 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 RPS26P2-201ENST00000440331 348 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 RPL17P49-201ENST00000443728 411 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AL133547.1-201ENST00000448546 220 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AC005297.2-201ENST00000450430 606 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 RPS20P32-201ENST00000456044 356 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 RPL7P49-201ENST00000471402 708 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AC010683.1-201ENST00000473673 378 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 KCTD9P5-201ENST00000504141 1170 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AC093767.1-201ENST00000504523 156 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AC034268.2-201ENST00000571784 482 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 DUXAP4-201ENST00000603046 613 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 RPL23AP92-201ENST00000603609 255 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AL590282.1-201ENST00000610379 1136 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AC007546.1-201ENST00000619452 559 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 ELL2P4-201ENST00000446870 1376 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AC130650.2-201ENST00000618736 2403 ntBASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
OTOP1Q7RTM1 AL049780.3-201ENST00000624612 1583 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 Y_RNA.453-201ENST00000384223 109 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 MTCO3P40-201ENST00000392516 676 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 MIR1277-201ENST00000408536 78 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 SNRPFP1-201ENST00000414761 252 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 RPS26P47-201ENST00000427219 348 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 AC009961.2-201ENST00000435771 251 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 FAM103A2P-201ENST00000444122 354 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 AC104073.1-201ENST00000451988 151 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 HMGB1P15-201ENST00000453854 435 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 HMGB1P36-201ENST00000487709 576 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 AC012170.1-201ENST00000495139 359 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 AC008958.1-201ENST00000511047 682 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 PTGES3P3-201ENST00000511479 482 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 AC008549.1-201ENST00000512900 643 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 Y_RNA.672-201ENST00000516289 104 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 RNU6-714P-201ENST00000516963 103 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 MIR4298-201ENST00000584380 73 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 HMGN1P30-201ENST00000589286 268 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 AC245014.2-201ENST00000603689 287 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 AC246785.4-201ENST00000605374 287 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 RNU6-87P-201ENST00000607561 108 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 AL161734.1-201ENST00000609720 557 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 AC006065.6-201ENST00000625201 545 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 AC010149.2-201ENST00000637608 315 ntBASIC5.12□□□□□ -1.59
OTOP1Q7RTM1 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms