Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF43Q68DV7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF43Q68DV7 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF43Q68DV7 RNU1-146P-201ENST00000364015 165 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 RNY4P16-201ENST00000364768 94 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 Y_RNA.364-201ENST00000365532 101 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 Y_RNA.489-201ENST00000384410 101 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 Y_RNA.556-201ENST00000384677 113 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF43Q68DV7 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 PRELID3BP11-201ENST00000414230 479 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 AC093655.2-201ENST00000425735 631 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 GSTM5P1-201ENST00000434751 660 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 AC002381.1-201ENST00000447049 280 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 AP000797.2-201ENST00000475768 606 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 SNRPCP2-201ENST00000504370 475 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 HSPD1P15-201ENST00000505573 1122 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 Y_RNA.668-201ENST00000516233 93 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 RNU6-941P-201ENST00000516346 108 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 RNA5SP337-201ENST00000517007 109 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 HMGB1P40-201ENST00000525121 540 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 HMGN2P47-201ENST00000559378 272 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 RPL10P14-201ENST00000565265 298 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 AC053481.3-201ENST00000577881 843 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 MIR4330-201ENST00000579077 105 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 MIR4472-2-201ENST00000582069 67 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 AF038458.1-201ENST00000588406 262 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 AL022099.1-201ENST00000604551 712 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 AC062037.2-201ENST00000610137 73 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 OR52H1-202ENST00000641796 1061 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF43Q68DV7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF43Q68DV7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF43Q68DV7 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF43Q68DV7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF43Q68DV7 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF43Q68DV7 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF43Q68DV7 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF43Q68DV7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF43Q68DV7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF43Q68DV7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF43Q68DV7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF43Q68DV7 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF43Q68DV7 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF43Q68DV7 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF43Q68DV7 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC100757.1-201ENST00000616872 1835 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 RNU6-1115P-201ENST00000362490 106 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 RNU6-853P-201ENST00000364306 107 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 RNU6-744P-201ENST00000365557 107 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 RNU4-48P-201ENST00000365559 182 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 RNU6-1316P-201ENST00000384242 108 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 AL049697.2-201ENST00000403708 294 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 RNU2-64P-201ENST00000411315 191 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 DPPA2P2-201ENST00000418220 897 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 NRBF2P3-201ENST00000432731 865 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 FABP5P14-201ENST00000437273 393 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 HMGB1P12-201ENST00000438594 598 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 RPL21P23-201ENST00000446654 460 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC245028.2-201ENST00000458673 253 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC128713.1-201ENST00000471495 306 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC015911.1-201ENST00000495111 156 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 EIF3KP3-201ENST00000514461 639 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 SCARNA16.4-201ENST00000516956 187 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 RN7SKP283-201ENST00000517197 270 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 AF279873.1-201ENST00000523393 313 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 AP004607.2-201ENST00000533949 322 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC008126.1-201ENST00000549019 480 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC127381.1-201ENST00000555979 939 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms