Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN20P56880 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.73□□□□□ -1.81
CLDN20P56880 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN20P56880 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN20P56880 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.73□□□□□ -1.81
CLDN20P56880 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.73□□□□□ -1.81
CLDN20P56880 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN20P56880 AC063950.1-201ENST00000552036 308 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN20P56880 AC007224.1-201ENST00000564410 144 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 AC053481.3-201ENST00000577881 843 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.73□□□□□ -1.81
CLDN20P56880 LLPHP1-201ENST00000603571 367 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 MIR6867-201ENST00000610636 67 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN20P56880 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.73□□□□□ -1.81
CLDN20P56880 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN20P56880 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN20P56880 NMD3P1-201ENST00000439704 1488 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN20P56880 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN20P56880 AC116667.1-201ENST00000604855 2072 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
CLDN20P56880 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN20P56880 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN20P56880 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 OR11H4-201ENST00000315409 1082 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 RNU6-501P-201ENST00000364072 100 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 RN7SKP227-201ENST00000364445 330 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 RNU6-356P-201ENST00000384140 107 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 RNU1-13P-201ENST00000384499 162 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 MIR3074-201ENST00000384885 81 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 MT-TC-201ENST00000387405 66 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN20P56880 MIR320C1-201ENST00000408566 88 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 RN7SKP266-201ENST00000410232 287 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 MTATP6P27-201ENST00000416987 621 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 AL356095.1-201ENST00000417217 199 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 MORF4L1P6-201ENST00000418771 268 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN20P56880 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN20P56880 PSMA6P3-201ENST00000428242 164 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN20P56880 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN20P56880 ATP5HP2-201ENST00000433885 485 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 LARP1BP3-201ENST00000437229 869 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 RPL23AP33-201ENST00000442301 452 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN20P56880 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN20P56880 BX322784.1-201ENST00000455793 1077 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN20P56880 AC091564.1-201ENST00000464563 479 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 MTND4LP3-201ENST00000468320 276 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN20P56880 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN20P56880 AC017015.1-201ENST00000477387 286 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN20P56880 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN20P56880 AC106872.2-201ENST00000494303 480 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 AC082651.2-201ENST00000496833 166 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 OR2A20P-203ENST00000498397 1268 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.72□□□□□ -1.81
CLDN20P56880 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN20P56880 RN7SKP21-201ENST00000516503 220 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN20P56880 AL139174.1-201ENST00000531489 886 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN20P56880 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.72□□□□□ -1.81
CLDN20P56880 TOMM20P2-201ENST00000540082 421 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CLDN20P56880 OR6C7P-201ENST00000547875 934 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN20P56880 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN20P56880 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN20P56880 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN20P56880 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN20P56880 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN20P56880 MTCYBP33-201ENST00000575007 1130 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN20P56880 BBIP1P1-201ENST00000602999 279 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 AL355812.1-201ENST00000603215 216 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 AC112187.2-201ENST00000604345 283 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 AC090186.1-201ENST00000605991 572 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN20P56880 AL158063.1-201ENST00000615349 536 ntBASIC3.72□□□□□ -1.81
CLDN20P56880 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLDN20P56880 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN20P56880 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN20P56880 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN20P56880 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
CLDN20P56880 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN20P56880 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CLDN20P56880 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CLDN20P56880 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CLDN20P56880 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN20P56880 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN20P56880 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
CLDN20P56880 Z82217.1-201ENST00000625157 8149 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms