Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN6P56747 RPL23AP67-201ENST00000465341 474 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 PRDX3P4-201ENST00000470828 747 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.01□□□□□ -1.93
CLDN6P56747 RN7SL442P-201ENST00000473804 320 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 AL024509.2-201ENST00000493462 493 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.01□□□□□ -1.93
CLDN6P56747 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN6P56747 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN6P56747 AC104057.1-201ENST00000515547 497 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 AC107934.2-201ENST00000518653 310 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN6P56747 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN6P56747 AP003385.6-201ENST00000531603 374 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN6P56747 HMGB1P6-201ENST00000569046 646 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 MIR4319-201ENST00000577285 85 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 MIR3186-201ENST00000577404 85 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN6P56747 NRBF2P5-201ENST00000603087 788 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 AC103881.1-201ENST00000603476 538 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 AC096586.1-201ENST00000610267 561 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN6P56747 AL163051.2-201ENST00000618976 735 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 AC006963.1-201ENST00000624003 1052 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.01□□□□□ -1.93
CLDN6P56747 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.01□□□□□ -1.93
CLDN6P56747 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
CLDN6P56747 SRP72P2-201ENST00000344851 1979 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.01□□□□□ -1.93
CLDN6P56747 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN6P56747 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN6P56747 AC116096.1-201ENST00000566804 2314 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
CLDN6P56747 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLDN6P56747 RNA5SP432-201ENST00000362480 116 ntBASIC3□□□□□ -1.93
CLDN6P56747 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3□□□□□ -1.93
CLDN6P56747 DEFB109C-201ENST00000382575 264 ntBASIC3□□□□□ -1.93
CLDN6P56747 DEFB109B-201ENST00000382656 264 ntBASIC3□□□□□ -1.93
CLDN6P56747 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3□□□□□ -1.93
CLDN6P56747 AL158825.1-201ENST00000414735 521 ntBASIC3□□□□□ -1.93
CLDN6P56747 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3□□□□□ -1.93
CLDN6P56747 GLRXP1-201ENST00000423261 334 ntBASIC3□□□□□ -1.93
CLDN6P56747 OOSP1P1-201ENST00000423265 274 ntBASIC3□□□□□ -1.93
CLDN6P56747 RPL23AP82-202ENST00000427528 469 ntBASIC3□□□□□ -1.93
CLDN6P56747 AC016696.1-201ENST00000446949 318 ntBASIC3□□□□□ -1.93
CLDN6P56747 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
CLDN6P56747 HMGB3P8-201ENST00000449709 577 ntBASIC3□□□□□ -1.93
CLDN6P56747 RPS24P6-201ENST00000452670 400 ntBASIC3□□□□□ -1.93
CLDN6P56747 CENPBD1P1-201ENST00000464061 469 ntBASIC3□□□□□ -1.93
CLDN6P56747 AC012181.1-201ENST00000479895 423 ntBASIC3□□□□□ -1.93
CLDN6P56747 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CLDN6P56747 SNORA31.20-201ENST00000517111 133 ntBASIC3□□□□□ -1.93
CLDN6P56747 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3□□□□□ -1.93
CLDN6P56747 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLDN6P56747 HIGD1AP6-201ENST00000521833 279 ntBASIC3□□□□□ -1.93
CLDN6P56747 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3□□□□□ -1.93
CLDN6P56747 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3□□□□□ -1.93
CLDN6P56747 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3□□□□□ -1.93
CLDN6P56747 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3□□□□□ -1.93
CLDN6P56747 AL669831.4-202ENST00000590817 238 ntBASIC3□□□□□ -1.93
CLDN6P56747 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3□□□□□ -1.93
CLDN6P56747 VN1R88P-201ENST00000596787 292 ntBASIC3□□□□□ -1.93
CLDN6P56747 AC040174.2-201ENST00000602701 465 ntBASIC3□□□□□ -1.93
CLDN6P56747 AC006254.3-201ENST00000603353 884 ntBASIC3□□□□□ -1.93
CLDN6P56747 AC100814.1-201ENST00000606963 623 ntBASIC3□□□□□ -1.93
CLDN6P56747 AC021851.1-201ENST00000608537 1082 ntBASIC3□□□□□ -1.93
CLDN6P56747 AC013468.1-201ENST00000608680 598 ntBASIC3□□□□□ -1.93
CLDN6P56747 AC112503.2-201ENST00000609005 552 ntBASIC3□□□□□ -1.93
CLDN6P56747 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3□□□□□ -1.93
CLDN6P56747 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3□□□□□ -1.93
CLDN6P56747 IGHVIII-44-202ENST00000636235 289 ntBASIC3□□□□□ -1.93
CLDN6P56747 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CLDN6P56747 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLDN6P56747 AC021755.1-201ENST00000559747 1447 ntBASIC3□□□□□ -1.93
CLDN6P56747 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLDN6P56747 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN6P56747 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN6P56747 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN6P56747 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN6P56747 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN6P56747 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLDN6P56747 SNORA18.3-201ENST00000384122 132 ntBASIC2.99□□□□□ -1.93
CLDN6P56747 AL031679.1-201ENST00000400616 525 ntBASIC2.99□□□□□ -1.93
CLDN6P56747 RNA5SP56-201ENST00000410277 118 ntBASIC2.99□□□□□ -1.93
CLDN6P56747 RNA5SP31-201ENST00000411144 127 ntBASIC2.99□□□□□ -1.93
CLDN6P56747 RNA5SP107-201ENST00000411358 122 ntBASIC2.99□□□□□ -1.93
CLDN6P56747 AL139413.1-201ENST00000421309 217 ntBASIC2.99□□□□□ -1.93
CLDN6P56747 FAR1P1-201ENST00000427163 934 ntBASIC2.99□□□□□ -1.93
CLDN6P56747 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.99□□□□□ -1.93
CLDN6P56747 RPL32P28-201ENST00000443577 397 ntBASIC2.99□□□□□ -1.93
CLDN6P56747 SSXP4-201ENST00000451349 245 ntBASIC2.99□□□□□ -1.93
CLDN6P56747 HMGB1P15-201ENST00000453854 435 ntBASIC2.99□□□□□ -1.93
CLDN6P56747 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN6P56747 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.99□□□□□ -1.93
CLDN6P56747 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.99□□□□□ -1.93
CLDN6P56747 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN6P56747 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.99□□□□□ -1.93
CLDN6P56747 H3F3AP1-201ENST00000559984 334 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms