Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 MIR191-201ENST00000384873 92 ntBASIC5.75□□□□□ -1.49
GPC1P35052 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
GPC1P35052 AL138885.1-201ENST00000405921 675 ntBASIC5.75□□□□□ -1.49
GPC1P35052 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.75□□□□□ -1.49
GPC1P35052 SYF2P2-201ENST00000417620 583 ntBASIC5.75□□□□□ -1.49
GPC1P35052 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.75□□□□□ -1.49
GPC1P35052 AC069213.2-201ENST00000420238 366 ntBASIC5.75□□□□□ -1.49
GPC1P35052 UBE2V1P4-201ENST00000425374 344 ntBASIC5.75□□□□□ -1.49
GPC1P35052 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.75□□□□□ -1.49
GPC1P35052 MYL8P-204ENST00000431574 518 ntBASIC5.75□□□□□ -1.49
GPC1P35052 LINC00328-2P-201ENST00000436585 219 ntBASIC5.75□□□□□ -1.49
GPC1P35052 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.75□□□□□ -1.49
GPC1P35052 Z83838.1-202ENST00000456225 839 ntBASIC5.75□□□□□ -1.49
GPC1P35052 LINC01399-202ENST00000458450 244 ntBASIC5.75□□□□□ -1.49
GPC1P35052 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.75□□□□□ -1.49
GPC1P35052 RN7SL552P-201ENST00000462094 276 ntBASIC5.75□□□□□ -1.49
GPC1P35052 RN7SL836P-201ENST00000476140 296 ntBASIC5.75□□□□□ -1.49
GPC1P35052 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.75□□□□□ -1.49
GPC1P35052 RNU7-4P-201ENST00000516961 62 ntBASIC5.75□□□□□ -1.49
GPC1P35052 AC022868.1-201ENST00000517767 391 ntBASIC5.75□□□□□ -1.49
GPC1P35052 HMGN1P28-201ENST00000521340 364 ntBASIC5.75□□□□□ -1.49
GPC1P35052 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.75□□□□□ -1.49
GPC1P35052 AC009643.1-201ENST00000532030 391 ntBASIC5.75□□□□□ -1.49
GPC1P35052 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.75□□□□□ -1.49
GPC1P35052 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.75□□□□□ -1.49
GPC1P35052 ELOCP5-201ENST00000604924 333 ntBASIC5.75□□□□□ -1.49
GPC1P35052 MIR6889-201ENST00000613185 59 ntBASIC5.75□□□□□ -1.49
GPC1P35052 AL159153.1-201ENST00000619688 317 ntBASIC5.75□□□□□ -1.49
GPC1P35052 AC132825.6-201ENST00000638861 357 ntBASIC5.75□□□□□ -1.49
GPC1P35052 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.75□□□□□ -1.49
GPC1P35052 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GPC1P35052 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
GPC1P35052 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
GPC1P35052 AC004656.1-201ENST00000568479 4951 ntBASIC5.75□□□□□ -1.49
GPC1P35052 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
GPC1P35052 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
GPC1P35052 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GPC1P35052 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GPC1P35052 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GPC1P35052 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
GPC1P35052 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GPC1P35052 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
GPC1P35052 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GPC1P35052 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GPC1P35052 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.74□□□□□ -1.49
GPC1P35052 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GPC1P35052 Y_RNA.65-201ENST00000362846 100 ntBASIC5.74□□□□□ -1.49
GPC1P35052 RNVU1-3-201ENST00000364313 161 ntBASIC5.74□□□□□ -1.49
GPC1P35052 RNU6-701P-201ENST00000384059 107 ntBASIC5.74□□□□□ -1.49
GPC1P35052 Y_RNA.518-201ENST00000384552 113 ntBASIC5.74□□□□□ -1.49
GPC1P35052 HMGB1P20-201ENST00000402555 677 ntBASIC5.74□□□□□ -1.49
GPC1P35052 RNA5SP198-201ENST00000410376 127 ntBASIC5.74□□□□□ -1.49
GPC1P35052 RNU2-14P-201ENST00000411053 191 ntBASIC5.74□□□□□ -1.49
GPC1P35052 Z82198.3-201ENST00000421145 199 ntBASIC5.74□□□□□ -1.49
GPC1P35052 MRPS21P2-201ENST00000424704 264 ntBASIC5.74□□□□□ -1.49
GPC1P35052 AL354707.3-201ENST00000427308 331 ntBASIC5.74□□□□□ -1.49
GPC1P35052 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GPC1P35052 CYCSP51-201ENST00000443545 318 ntBASIC5.74□□□□□ -1.49
GPC1P35052 FCF1P4-201ENST00000448326 183 ntBASIC5.74□□□□□ -1.49
GPC1P35052 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.74□□□□□ -1.49
GPC1P35052 PCMTD1P1-201ENST00000455560 355 ntBASIC5.74□□□□□ -1.49
GPC1P35052 AC053481.1-201ENST00000467217 306 ntBASIC5.74□□□□□ -1.49
GPC1P35052 AC022034.3-201ENST00000471393 478 ntBASIC5.74□□□□□ -1.49
GPC1P35052 AC087385.1-201ENST00000475062 312 ntBASIC5.74□□□□□ -1.49
GPC1P35052 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.74□□□□□ -1.49
GPC1P35052 RPL12P30-201ENST00000488389 499 ntBASIC5.74□□□□□ -1.49
GPC1P35052 AL035690.1-201ENST00000490892 383 ntBASIC5.74□□□□□ -1.49
GPC1P35052 AC008945.1-201ENST00000505144 499 ntBASIC5.74□□□□□ -1.49
GPC1P35052 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.74□□□□□ -1.49
GPC1P35052 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GPC1P35052 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.74□□□□□ -1.49
GPC1P35052 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.74□□□□□ -1.49
GPC1P35052 MT1CP-201ENST00000567054 174 ntBASIC5.74□□□□□ -1.49
GPC1P35052 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
GPC1P35052 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GPC1P35052 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.74□□□□□ -1.49
GPC1P35052 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.74□□□□□ -1.49
GPC1P35052 VN1R91P-201ENST00000594377 169 ntBASIC5.74□□□□□ -1.49
GPC1P35052 MIR6823-201ENST00000622118 61 ntBASIC5.74□□□□□ -1.49
GPC1P35052 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.74□□□□□ -1.49
GPC1P35052 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GPC1P35052 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
GPC1P35052 AC011933.2-201ENST00000578539 2790 ntBASIC5.74□□□□□ -1.49
GPC1P35052 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GPC1P35052 AC232271.1-201ENST00000602455 2715 ntBASIC5.74□□□□□ -1.49
GPC1P35052 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.74□□□□□ -1.49
GPC1P35052 AL049555.1-201ENST00000562834 1933 ntBASIC5.74□□□□□ -1.49
GPC1P35052 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
GPC1P35052 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
GPC1P35052 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.74□□□□□ -1.49
GPC1P35052 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
GPC1P35052 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.73□□□□□ -1.49
GPC1P35052 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GPC1P35052 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GPC1P35052 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GPC1P35052 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
GPC1P35052 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GPC1P35052 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GPC1P35052 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GPC1P35052 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms