Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 Y_RNA.311-201ENST00000365068 96 ntBASIC3.72□□□□□ -1.81
CDH3P22223 AL359837.1-201ENST00000381357 287 ntBASIC3.72□□□□□ -1.81
CDH3P22223 MIR591-201ENST00000385290 95 ntBASIC3.72□□□□□ -1.81
CDH3P22223 SNORA48.7-201ENST00000391302 135 ntBASIC3.72□□□□□ -1.81
CDH3P22223 ATP5F1P4-201ENST00000397288 746 ntBASIC3.72□□□□□ -1.81
CDH3P22223 RN7SKP285-201ENST00000410137 318 ntBASIC3.72□□□□□ -1.81
CDH3P22223 AC006960.1-201ENST00000419980 153 ntBASIC3.72□□□□□ -1.81
CDH3P22223 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH3P22223 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH3P22223 AL445584.1-201ENST00000431451 330 ntBASIC3.72□□□□□ -1.81
CDH3P22223 RPL7P34-201ENST00000433316 712 ntBASIC3.72□□□□□ -1.81
CDH3P22223 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH3P22223 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH3P22223 AL662791.1-201ENST00000441992 928 ntBASIC3.72□□□□□ -1.81
CDH3P22223 AL500522.2-201ENST00000448562 343 ntBASIC3.72□□□□□ -1.81
CDH3P22223 SLC31A1P1-201ENST00000451221 567 ntBASIC3.72□□□□□ -1.81
CDH3P22223 AC104073.1-201ENST00000451988 151 ntBASIC3.72□□□□□ -1.81
CDH3P22223 ANKRD26P4-201ENST00000455755 950 ntBASIC3.72□□□□□ -1.81
CDH3P22223 MTND1P16-201ENST00000465177 898 ntBASIC3.72□□□□□ -1.81
CDH3P22223 RPL7P18-201ENST00000478965 734 ntBASIC3.72□□□□□ -1.81
CDH3P22223 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH3P22223 RPL7P38-201ENST00000488396 739 ntBASIC3.72□□□□□ -1.81
CDH3P22223 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH3P22223 OR4G11P-201ENST00000492842 939 ntBASIC3.72□□□□□ -1.81
CDH3P22223 SETP14-201ENST00000497538 873 ntBASIC3.72□□□□□ -1.81
CDH3P22223 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH3P22223 HMGB1P28-201ENST00000507778 552 ntBASIC3.72□□□□□ -1.81
CDH3P22223 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH3P22223 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH3P22223 AC022695.1-201ENST00000522089 237 ntBASIC3.72□□□□□ -1.81
CDH3P22223 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH3P22223 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH3P22223 UBTFL10-201ENST00000528532 562 ntBASIC3.72□□□□□ -1.81
CDH3P22223 SLC2A13P1-201ENST00000531560 322 ntBASIC3.72□□□□□ -1.81
CDH3P22223 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.72□□□□□ -1.81
CDH3P22223 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.72□□□□□ -1.81
CDH3P22223 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH3P22223 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH3P22223 AL353778.1-201ENST00000603149 408 ntBASIC3.72□□□□□ -1.81
CDH3P22223 AC006254.3-201ENST00000603353 884 ntBASIC3.72□□□□□ -1.81
CDH3P22223 YWHAQP7-201ENST00000603536 658 ntBASIC3.72□□□□□ -1.81
CDH3P22223 AC011468.4-201ENST00000603942 409 ntBASIC3.72□□□□□ -1.81
CDH3P22223 AC009220.3-201ENST00000604318 586 ntBASIC3.72□□□□□ -1.81
CDH3P22223 AC069304.2-201ENST00000605154 435 ntBASIC3.72□□□□□ -1.81
CDH3P22223 HMGN2P28-201ENST00000606102 262 ntBASIC3.72□□□□□ -1.81
CDH3P22223 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH3P22223 AL139418.1-201ENST00000613613 177 ntBASIC3.72□□□□□ -1.81
CDH3P22223 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH3P22223 AC068722.2-201ENST00000618734 544 ntBASIC3.72□□□□□ -1.81
CDH3P22223 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH3P22223 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH3P22223 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH3P22223 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH3P22223 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CDH3P22223 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CDH3P22223 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.71□□□□□ -1.81
CDH3P22223 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CDH3P22223 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CDH3P22223 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH3P22223 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH3P22223 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH3P22223 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH3P22223 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH3P22223 RNU6-600P-201ENST00000362524 99 ntBASIC3.71□□□□□ -1.82
CDH3P22223 RNU6-335P-201ENST00000364563 113 ntBASIC3.71□□□□□ -1.82
CDH3P22223 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH3P22223 MIR184-201ENST00000384962 84 ntBASIC3.71□□□□□ -1.82
CDH3P22223 TAF9BP1-201ENST00000396646 746 ntBASIC3.71□□□□□ -1.82
CDH3P22223 SSXP10-201ENST00000402595 565 ntBASIC3.71□□□□□ -1.82
CDH3P22223 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH3P22223 AC107081.1-201ENST00000414975 361 ntBASIC3.71□□□□□ -1.82
CDH3P22223 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CDH3P22223 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH3P22223 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH3P22223 CETN4P-201ENST00000432407 469 ntBASIC3.71□□□□□ -1.82
CDH3P22223 RPL23AP16-201ENST00000441715 421 ntBASIC3.71□□□□□ -1.82
CDH3P22223 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH3P22223 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH3P22223 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH3P22223 AC026784.1-201ENST00000507986 352 ntBASIC3.71□□□□□ -1.82
CDH3P22223 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH3P22223 AC093853.1-201ENST00000515689 483 ntBASIC3.71□□□□□ -1.82
CDH3P22223 RNY4P37-201ENST00000516225 96 ntBASIC3.71□□□□□ -1.82
CDH3P22223 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH3P22223 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH3P22223 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH3P22223 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.71□□□□□ -1.82
CDH3P22223 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH3P22223 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH3P22223 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH3P22223 AC087499.8-201ENST00000578406 226 ntBASIC3.71□□□□□ -1.82
CDH3P22223 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
CDH3P22223 AL139344.1-201ENST00000605228 195 ntBASIC3.71□□□□□ -1.82
CDH3P22223 AP003485.2-201ENST00000623636 610 ntBASIC3.71□□□□□ -1.82
CDH3P22223 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH3P22223 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH3P22223 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH3P22223 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH3P22223 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CDH3P22223 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms