Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AL023881.1-201ENST00000621088 301 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 AC000123.2-201ENST00000623124 461 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 AP000843.1-201ENST00000624880 701 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.83□□□□□ -1.48
LMNB1P20700 AC092125.1-201ENST00000562568 1995 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LMNB1P20700 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
LMNB1P20700 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.83□□□□□ -1.48
LMNB1P20700 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LMNB1P20700 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LMNB1P20700 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LMNB1P20700 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LMNB1P20700 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LMNB1P20700 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LMNB1P20700 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LMNB1P20700 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.82□□□□□ -1.48
LMNB1P20700 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LMNB1P20700 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LMNB1P20700 SNORA70.4-201ENST00000365509 134 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 Y_RNA.481-201ENST00000384373 102 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 RNU6-878P-201ENST00000384578 110 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 MIR670-201ENST00000390142 98 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 GSTM3P2-201ENST00000412746 530 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.82□□□□□ -1.48
LMNB1P20700 MTATP6P18-201ENST00000417994 673 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 AL645608.4-201ENST00000423619 154 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 RPS29P17-201ENST00000430795 166 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 RPL19P16-201ENST00000433839 588 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.82□□□□□ -1.48
LMNB1P20700 RPL23AP74-201ENST00000437246 471 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 CALM1P1-201ENST00000442082 433 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.82□□□□□ -1.48
LMNB1P20700 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.82□□□□□ -1.48
LMNB1P20700 AC090804.1-201ENST00000448870 490 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.82□□□□□ -1.48
LMNB1P20700 GAPDHP14-201ENST00000450472 937 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 SNRPGP6-201ENST00000451124 220 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 RPS20P20-201ENST00000460498 340 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 AC104563.1-201ENST00000476147 376 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 AC139783.2-201ENST00000504847 1145 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 AC010587.1-201ENST00000505809 469 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LMNB1P20700 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.82□□□□□ -1.48
LMNB1P20700 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.82□□□□□ -1.48
LMNB1P20700 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.82□□□□□ -1.48
LMNB1P20700 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.82□□□□□ -1.48
LMNB1P20700 ARL2BPP2-201ENST00000550907 489 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 LSM6P2-201ENST00000552208 177 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.82□□□□□ -1.48
LMNB1P20700 AC099489.2-201ENST00000574976 260 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.82□□□□□ -1.48
LMNB1P20700 AC025449.1-201ENST00000603896 529 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 AL136363.1-201ENST00000605349 337 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 AC007038.2-201ENST00000608095 740 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 AL355472.4-201ENST00000610233 626 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.82□□□□□ -1.48
LMNB1P20700 AC067931.1-201ENST00000624190 671 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.82□□□□□ -1.48
LMNB1P20700 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.82□□□□□ -1.48
LMNB1P20700 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.82□□□□□ -1.48
LMNB1P20700 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LMNB1P20700 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LMNB1P20700 AC008758.3-201ENST00000507003 1829 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 XPOTP1-201ENST00000443317 2398 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LMNB1P20700 SALL4P2-201ENST00000423288 2910 ntBASIC5.82□□□□□ -1.48
LMNB1P20700 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LMNB1P20700 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LMNB1P20700 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
LMNB1P20700 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LMNB1P20700 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
LMNB1P20700 LINC01109-201ENST00000603837 3081 ntBASIC5.81□□□□□ -1.48
LMNB1P20700 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LMNB1P20700 AC093535.2-201ENST00000624769 2326 ntBASIC5.81□□□□□ -1.48
LMNB1P20700 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.81□□□□□ -1.48
LMNB1P20700 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.81□□□□□ -1.48
LMNB1P20700 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
LMNB1P20700 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
LMNB1P20700 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LMNB1P20700 RNA5SP391-201ENST00000363456 119 ntBASIC5.81□□□□□ -1.48
LMNB1P20700 Y_RNA.142-201ENST00000363491 102 ntBASIC5.81□□□□□ -1.48
LMNB1P20700 OR1L6-202ENST00000373684 1044 ntBASIC5.81□□□□□ -1.48
LMNB1P20700 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.81□□□□□ -1.48
LMNB1P20700 MRPL42P2-201ENST00000403169 426 ntBASIC5.81□□□□□ -1.48
LMNB1P20700 EEF1A1P40-201ENST00000412883 573 ntBASIC5.81□□□□□ -1.48
LMNB1P20700 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.81□□□□□ -1.48
LMNB1P20700 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.81□□□□□ -1.48
LMNB1P20700 AL691482.1-201ENST00000453255 87 ntBASIC5.81□□□□□ -1.48
LMNB1P20700 TRBV26-201ENST00000456572 344 ntBASIC5.81□□□□□ -1.48
LMNB1P20700 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.81□□□□□ -1.48
LMNB1P20700 AC034222.1-201ENST00000494052 532 ntBASIC5.81□□□□□ -1.48
LMNB1P20700 SCARNA15.1-201ENST00000516384 125 ntBASIC5.81□□□□□ -1.48
LMNB1P20700 IGLVIV-65-201ENST00000517313 360 ntBASIC5.81□□□□□ -1.48
LMNB1P20700 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.81□□□□□ -1.48
LMNB1P20700 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.81□□□□□ -1.48
LMNB1P20700 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.81□□□□□ -1.48
LMNB1P20700 MIR4795-201ENST00000584182 89 ntBASIC5.81□□□□□ -1.48
LMNB1P20700 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.81□□□□□ -1.48
LMNB1P20700 AL353997.4-201ENST00000586196 166 ntBASIC5.81□□□□□ -1.48
LMNB1P20700 IPO5P1-202ENST00000600039 287 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms