Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
COL6A2P12110 AL354719.1-201ENST00000406535 843 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 AC007390.1-201ENST00000415722 356 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL6A2P12110 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.91□□□□□ -1.62
COL6A2P12110 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.91□□□□□ -1.62
COL6A2P12110 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL6A2P12110 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.91□□□□□ -1.62
COL6A2P12110 RPS20P21-201ENST00000466859 343 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.91□□□□□ -1.62
COL6A2P12110 AC097484.1-201ENST00000471148 389 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 AC010683.1-201ENST00000473673 378 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 RPS21P4-201ENST00000487122 248 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 AC010350.1-201ENST00000504908 231 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 AC008638.1-201ENST00000506035 866 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 BX510359.5-201ENST00000515651 304 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 SNORD60.2-201ENST00000516883 86 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 RN7SKP260-201ENST00000516907 149 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 RNU6-410P-201ENST00000517006 107 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.91□□□□□ -1.62
COL6A2P12110 IGKV2-18-201ENST00000522607 343 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 Z84480.1-201ENST00000605131 311 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 AC010424.2-201ENST00000607594 443 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 AC099494.2-201ENST00000623371 978 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 AC112487.2-201ENST00000637950 304 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL6A2P12110 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL6A2P12110 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.91□□□□□ -1.62
COL6A2P12110 MAPK10-320ENST00000641462 6696 ntBASIC4.91□□□□□ -1.62
COL6A2P12110 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.91□□□□□ -1.62
COL6A2P12110 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL6A2P12110 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.91□□□□□ -1.62
COL6A2P12110 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
COL6A2P12110 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL6A2P12110 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL6A2P12110 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL6A2P12110 AC006026.1-201ENST00000444025 1803 ntBASIC4.9□□□□□ -1.62
COL6A2P12110 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL6A2P12110 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL6A2P12110 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.9□□□□□ -1.62
COL6A2P12110 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.62
COL6A2P12110 Y_RNA.356-201ENST00000365475 113 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL6A2P12110 SNORA70.10-201ENST00000384515 134 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL6A2P12110 RNU6-1068P-201ENST00000410958 103 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 BX510359.3-201ENST00000422168 306 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.9□□□□□ -1.63
COL6A2P12110 OR4F13P-201ENST00000428478 931 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 RPL36AP53-201ENST00000432891 316 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 TIMM9P1-201ENST00000436122 256 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.9□□□□□ -1.63
COL6A2P12110 AC127537.2-201ENST00000439258 465 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.9□□□□□ -1.63
COL6A2P12110 BNIP3P2-201ENST00000441221 577 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 DDX3P2-201ENST00000446138 111 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 SLC25A18P1-201ENST00000449385 454 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 IGHV5-78-201ENST00000450948 295 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.9□□□□□ -1.63
COL6A2P12110 SNORD121B-201ENST00000458838 81 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
COL6A2P12110 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.9□□□□□ -1.63
COL6A2P12110 RNA5SP401-201ENST00000515920 127 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.9□□□□□ -1.63
COL6A2P12110 OR4R1P-201ENST00000529879 463 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 OR5B19P-201ENST00000531766 928 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.9□□□□□ -1.63
COL6A2P12110 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.9□□□□□ -1.63
COL6A2P12110 MIR3176-201ENST00000582210 90 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 AC105224.1-201ENST00000587055 421 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 AC098848.2-201ENST00000588023 330 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 VN1R80P-201ENST00000597126 338 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 AC007497.1-201ENST00000610421 561 ntBASIC4.9□□□□□ -1.63
COL6A2P12110 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.9□□□□□ -1.63
COL6A2P12110 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL6A2P12110 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL6A2P12110 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL6A2P12110 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.9□□□□□ -1.63
COL6A2P12110 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
COL6A2P12110 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
COL6A2P12110 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL6A2P12110 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
COL6A2P12110 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.9□□□□□ -1.63
COL6A2P12110 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
COL6A2P12110 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL6A2P12110 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL6A2P12110 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL6A2P12110 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL6A2P12110 AC009643.2-201ENST00000603543 1448 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL6A2P12110 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.89□□□□□ -1.63
COL6A2P12110 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL6A2P12110 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL6A2P12110 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
COL6A2P12110 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL6A2P12110 RPL7P26-201ENST00000333817 754 ntBASIC4.89□□□□□ -1.63
COL6A2P12110 U3.2-201ENST00000362981 210 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms