Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CFTRP1-201ENST00000456646 183 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.62□□□□□ -1.83
PDGFBP01127 AL133477.1-201ENST00000457472 514 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 AC010285.1-201ENST00000470580 392 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 KC877373.1-201ENST00000479066 408 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 AC079203.1-201ENST00000487972 404 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 GTF2IP9-201ENST00000502460 301 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 UBE2V1P12-201ENST00000503954 474 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 BOLA3P3-201ENST00000505182 232 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.62□□□□□ -1.83
PDGFBP01127 SNORA31.20-201ENST00000517111 133 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 IGKV2-26-201ENST00000518305 343 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.62□□□□□ -1.83
PDGFBP01127 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PDGFBP01127 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.62□□□□□ -1.83
PDGFBP01127 SULT1C2P1-202ENST00000562418 459 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 AL049838.1-201ENST00000563647 981 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 CYP4A43P-201ENST00000568156 121 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.62□□□□□ -1.83
PDGFBP01127 MIR5004-201ENST00000579078 107 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 SNORD84-203ENST00000584275 78 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 AP003973.1-201ENST00000604639 691 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 VN1R7P-201ENST00000619242 903 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 AC092650.2-201ENST00000619984 902 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 AC009318.4-201ENST00000620496 486 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 AL590240.3-201ENST00000621416 943 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 AC026422.1-201ENST00000623961 452 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.62□□□□□ -1.83
PDGFBP01127 AC026634.1-201ENST00000634369 198 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.62□□□□□ -1.83
PDGFBP01127 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDGFBP01127 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.62□□□□□ -1.83
PDGFBP01127 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDGFBP01127 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
PDGFBP01127 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PDGFBP01127 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDGFBP01127 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.62□□□□□ -1.83
PDGFBP01127 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PDGFBP01127 SRP72P2-201ENST00000344851 1979 ntBASIC3.62□□□□□ -1.83
PDGFBP01127 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.61□□□□□ -1.83
PDGFBP01127 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDGFBP01127 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
PDGFBP01127 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
PDGFBP01127 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDGFBP01127 RNU6-50P-201ENST00000362356 103 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 RNA5SP258-201ENST00000362750 119 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 RNU6-236P-201ENST00000363886 106 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 RNU6-629P-201ENST00000384061 103 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 SNORD116-12-201ENST00000384468 92 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 AL024474.1-201ENST00000404655 591 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 RNU6-575P-201ENST00000411326 105 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.61□□□□□ -1.83
PDGFBP01127 AMD1P2-201ENST00000412936 992 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 FCF1P2-201ENST00000415284 583 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 HIGD1AP12-201ENST00000427832 281 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 AC005345.1-201ENST00000431868 217 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 HLA-N-201ENST00000437516 135 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 AC004854.1-201ENST00000440356 349 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 RPL7P52-201ENST00000449200 742 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PDGFBP01127 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.61□□□□□ -1.83
PDGFBP01127 RPL27AP5-201ENST00000469428 449 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PDGFBP01127 KLRA1P-201ENST00000503499 986 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.61□□□□□ -1.83
PDGFBP01127 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.61□□□□□ -1.83
PDGFBP01127 RNU6-885P-201ENST00000516607 104 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 AC023632.1-201ENST00000518463 375 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.61□□□□□ -1.83
PDGFBP01127 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PDGFBP01127 AC091515.1-201ENST00000548110 679 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 AL121603.1-201ENST00000553815 142 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.61□□□□□ -1.83
PDGFBP01127 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.61□□□□□ -1.83
PDGFBP01127 MIR5708-201ENST00000579723 85 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 AL163642.2-201ENST00000604722 1019 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 VIS1.1-201ENST00000610517 203 ntBASIC3.61□□□□□ -1.83
PDGFBP01127 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDGFBP01127 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PDGFBP01127 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
PDGFBP01127 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
PDGFBP01127 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.61□□□□□ -1.83
PDGFBP01127 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
PDGFBP01127 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.61□□□□□ -1.83
PDGFBP01127 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PDGFBP01127 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PDGFBP01127 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDGFBP01127 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PDGFBP01127 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PDGFBP01127 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PDGFBP01127 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDGFBP01127 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PDGFBP01127 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PDGFBP01127 RNU6-1249P-201ENST00000363237 111 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PDGFBP01127 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.6□□□□□ -1.83
PDGFBP01127 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.6□□□□□ -1.83
PDGFBP01127 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.6□□□□□ -1.83
PDGFBP01127 RNU6-328P-201ENST00000390887 106 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms