Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 HIGD1AP3-201ENST00000515857 278 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 RNA5SP360-201ENST00000516555 118 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.71□□□□□ -1.66
CNOT4O95628 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.71□□□□□ -1.66
CNOT4O95628 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.71□□□□□ -1.66
CNOT4O95628 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.71□□□□□ -1.66
CNOT4O95628 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.71□□□□□ -1.66
CNOT4O95628 AP003072.2-201ENST00000527756 676 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.71□□□□□ -1.66
CNOT4O95628 AC022882.1-201ENST00000532142 501 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 AP004607.2-201ENST00000533949 322 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 AC020661.2-201ENST00000560114 134 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 HMGB1P6-201ENST00000569046 646 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 LARP7P2-201ENST00000575306 125 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 AC010525.2-201ENST00000590920 195 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.71□□□□□ -1.66
CNOT4O95628 AC025588.3-201ENST00000604182 274 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.71□□□□□ -1.66
CNOT4O95628 AC133644.2-201ENST00000608142 540 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.71□□□□□ -1.66
CNOT4O95628 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.71□□□□□ -1.66
CNOT4O95628 C2orf27A-204ENST00000623058 969 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.71□□□□□ -1.66
CNOT4O95628 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.71□□□□□ -1.66
CNOT4O95628 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.71□□□□□ -1.66
CNOT4O95628 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CNOT4O95628 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNOT4O95628 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CNOT4O95628 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNOT4O95628 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CNOT4O95628 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT4O95628 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CNOT4O95628 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CNOT4O95628 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT4O95628 MTND5P3-201ENST00000438536 1800 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.7□□□□□ -1.66
CNOT4O95628 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CNOT4O95628 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CNOT4O95628 NACAP2-201ENST00000318548 624 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT4O95628 RNA5SP305-201ENST00000362665 119 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 Y_RNA.132-201ENST00000363421 102 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 RNU4-1-201ENST00000363925 141 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 RNU6-853P-201ENST00000364306 107 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 RNU6-343P-201ENST00000364709 104 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 RNU6-108P-201ENST00000365558 107 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 SNORA16A-201ENST00000384342 137 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 RNU6-738P-201ENST00000384531 106 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 MT-TC-201ENST00000387405 66 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT4O95628 RNU2-9P-201ENST00000410194 145 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 RNA5SP239-201ENST00000410218 129 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.7□□□□□ -1.66
CNOT4O95628 GPS2P1-201ENST00000411761 986 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AC009161.1-201ENST00000417306 376 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CNOT4O95628 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.7□□□□□ -1.66
CNOT4O95628 RBMY2QP-201ENST00000429799 1147 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AC119618.1-201ENST00000434191 222 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AL161722.2-201ENST00000434731 981 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AC024082.2-201ENST00000434771 238 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AC236972.2-201ENST00000434979 310 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AL356276.2-201ENST00000435919 558 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.7□□□□□ -1.66
CNOT4O95628 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.7□□□□□ -1.66
CNOT4O95628 AC006466.1-201ENST00000438721 289 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.7□□□□□ -1.66
CNOT4O95628 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.7□□□□□ -1.66
CNOT4O95628 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.7□□□□□ -1.66
CNOT4O95628 AL590399.6-201ENST00000446396 307 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.7□□□□□ -1.66
CNOT4O95628 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AP000926.1-201ENST00000479573 241 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 RPS15AP36-201ENST00000492022 382 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.7□□□□□ -1.66
CNOT4O95628 RPS4XP20-201ENST00000505751 772 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.7□□□□□ -1.66
CNOT4O95628 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 RN7SKP116-201ENST00000516902 319 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AC107953.1-201ENST00000522216 297 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.7□□□□□ -1.66
CNOT4O95628 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.7□□□□□ -1.66
CNOT4O95628 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.7□□□□□ -1.66
CNOT4O95628 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.7□□□□□ -1.66
CNOT4O95628 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.7□□□□□ -1.66
CNOT4O95628 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 MIR3118-1-201ENST00000581787 76 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.7□□□□□ -1.66
CNOT4O95628 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.7□□□□□ -1.66
CNOT4O95628 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.7□□□□□ -1.66
CNOT4O95628 AC004853.1-201ENST00000604902 698 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AC113139.1-201ENST00000605049 239 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AC244107.2-201ENST00000611773 76 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AL356585.4-201ENST00000623078 1229 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AC091953.2-201ENST00000623979 160 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 AC090617.10-201ENST00000624308 134 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.7□□□□□ -1.66
CNOT4O95628 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CNOT4O95628 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms