Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCD1O75127 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCD1O75127 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCD1O75127 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.31□□□□□ -1.4
PTCD1O75127 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTCD1O75127 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
PTCD1O75127 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTCD1O75127 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTCD1O75127 AC006020.1-201ENST00000420179 1854 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTCD1O75127 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PTCD1O75127 MTND4P1-201ENST00000457501 1466 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTCD1O75127 Y_RNA.234-201ENST00000364409 97 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 SNORA70.2-201ENST00000364506 135 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 Y_RNA.255-201ENST00000364581 97 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 SNORA70F-201ENST00000384142 135 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 RNU6-474P-201ENST00000384243 107 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 Y_RNA.459-201ENST00000384251 102 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 RNU6-331P-201ENST00000384724 107 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 SSXP10-201ENST00000402595 565 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 AL136116.1-201ENST00000403591 381 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 MIR548P-201ENST00000408336 84 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.3□□□□□ -1.4
PTCD1O75127 NPM1P18-201ENST00000434232 732 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.3□□□□□ -1.4
PTCD1O75127 ARL2BPP10-201ENST00000446487 531 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 AC055855.1-201ENST00000489563 579 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 RN7SL441P-201ENST00000492388 296 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC6.3□□□□□ -1.4
PTCD1O75127 SCARNA22-201ENST00000503991 125 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCD1O75127 AC021146.1-201ENST00000511202 716 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 PTP4A1P4-201ENST00000512479 322 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 ENPP7P9-201ENST00000514456 627 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 RN7SKP116-201ENST00000516902 319 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 HMGN2P47-201ENST00000559378 272 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 NDUFB4P11-201ENST00000560510 395 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 AC093249.1-201ENST00000567049 203 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 AC090615.1-201ENST00000577519 154 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 AC022884.2-201ENST00000578535 580 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 AC005899.7-201ENST00000618199 588 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 AC009318.4-201ENST00000620496 486 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 CR381572.2-201ENST00000624852 397 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCD1O75127 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.3□□□□□ -1.4
PTCD1O75127 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.3□□□□□ -1.4
PTCD1O75127 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTCD1O75127 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTCD1O75127 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTCD1O75127 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PTCD1O75127 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PTCD1O75127 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PTCD1O75127 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.29□□□□□ -1.4
PTCD1O75127 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTCD1O75127 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTCD1O75127 RNU6-996P-201ENST00000365438 107 ntBASIC6.29□□□□□ -1.4
PTCD1O75127 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PTCD1O75127 SNORD37.1-201ENST00000390968 65 ntBASIC6.29□□□□□ -1.4
PTCD1O75127 AC114755.2-201ENST00000413520 361 ntBASIC6.29□□□□□ -1.4
PTCD1O75127 RPS7P15-201ENST00000415804 584 ntBASIC6.29□□□□□ -1.4
PTCD1O75127 PSMA6P3-201ENST00000428242 164 ntBASIC6.29□□□□□ -1.4
PTCD1O75127 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.29□□□□□ -1.4
PTCD1O75127 RPL23AP1-201ENST00000428990 471 ntBASIC6.29□□□□□ -1.4
PTCD1O75127 MTND5P28-201ENST00000438005 1594 ntBASIC6.29□□□□□ -1.4
PTCD1O75127 AC000111.2-201ENST00000448200 210 ntBASIC6.29□□□□□ -1.4
PTCD1O75127 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC6.29□□□□□ -1.4
PTCD1O75127 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.29□□□□□ -1.4
PTCD1O75127 AC104057.1-201ENST00000515547 497 ntBASIC6.29□□□□□ -1.4
PTCD1O75127 SNORA19.2-201ENST00000516013 114 ntBASIC6.29□□□□□ -1.4
PTCD1O75127 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.29□□□□□ -1.4
PTCD1O75127 AC027369.5-201ENST00000533838 755 ntBASIC6.29□□□□□ -1.4
PTCD1O75127 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.29□□□□□ -1.4
PTCD1O75127 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.29□□□□□ -1.4
PTCD1O75127 RN7SL802P-201ENST00000577858 299 ntBASIC6.29□□□□□ -1.4
PTCD1O75127 NF1P5-201ENST00000588287 448 ntBASIC6.29□□□□□ -1.4
PTCD1O75127 AL049794.2-201ENST00000616301 365 ntBASIC6.29□□□□□ -1.4
PTCD1O75127 AL159972.1-201ENST00000625150 448 ntBASIC6.29□□□□□ -1.4
PTCD1O75127 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.29□□□□□ -1.4
PTCD1O75127 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.29□□□□□ -1.4
PTCD1O75127 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.29□□□□□ -1.4
PTCD1O75127 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTCD1O75127 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTCD1O75127 SMG1P7-201ENST00000565246 2704 ntBASIC6.28□□□□□ -1.4
PTCD1O75127 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PTCD1O75127 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PTCD1O75127 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
PTCD1O75127 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PTCD1O75127 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.28□□□□□ -1.4
PTCD1O75127 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.28□□□□□ -1.4
PTCD1O75127 AC063976.2-201ENST00000425667 3556 ntBASIC6.28□□□□□ -1.4
PTCD1O75127 Y_RNA.145-201ENST00000363527 102 ntBASIC6.28□□□□□ -1.4
PTCD1O75127 Y_RNA.605-201ENST00000410577 105 ntBASIC6.28□□□□□ -1.4
PTCD1O75127 GPS2P1-201ENST00000411761 986 ntBASIC6.28□□□□□ -1.4
PTCD1O75127 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.28□□□□□ -1.4
PTCD1O75127 CHIAP3-201ENST00000423668 1133 ntBASIC6.28□□□□□ -1.4
PTCD1O75127 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PTCD1O75127 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.28□□□□□ -1.4
PTCD1O75127 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.28□□□□□ -1.4
PTCD1O75127 RPL30P11-201ENST00000495304 339 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms