Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 MIR4474-201ENST00000579189 78 ntBASIC3.74□□□□□ -1.81
BRD4O60885 AC064859.1-201ENST00000624741 174 ntBASIC3.74□□□□□ -1.81
BRD4O60885 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
BRD4O60885 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
BRD4O60885 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BRD4O60885 MTND4P34-201ENST00000572715 1371 ntBASIC3.73□□□□□ -1.81
BRD4O60885 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
BRD4O60885 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.73□□□□□ -1.81
BRD4O60885 RPS24P8-201ENST00000431490 402 ntBASIC3.73□□□□□ -1.81
BRD4O60885 AC006483.1-201ENST00000487308 313 ntBASIC3.73□□□□□ -1.81
BRD4O60885 SNORA31.21-201ENST00000517180 77 ntBASIC3.73□□□□□ -1.81
BRD4O60885 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.73□□□□□ -1.81
BRD4O60885 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.73□□□□□ -1.81
BRD4O60885 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.73□□□□□ -1.81
BRD4O60885 AC010198.2-201ENST00000550612 259 ntBASIC3.73□□□□□ -1.81
BRD4O60885 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.73□□□□□ -1.81
BRD4O60885 ZNF861P-201ENST00000588126 639 ntBASIC3.73□□□□□ -1.81
BRD4O60885 AL136164.4-201ENST00000625013 2135 ntBASIC3.73□□□□□ -1.81
BRD4O60885 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
BRD4O60885 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.73□□□□□ -1.81
BRD4O60885 AC009487.2-201ENST00000420969 6821 ntBASIC3.72□□□□□ -1.81
BRD4O60885 RNU6-673P-201ENST00000365084 104 ntBASIC3.72□□□□□ -1.81
BRD4O60885 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.72□□□□□ -1.81
BRD4O60885 RPL23AP47-201ENST00000408017 460 ntBASIC3.72□□□□□ -1.81
BRD4O60885 RN7SKP192-201ENST00000411291 327 ntBASIC3.72□□□□□ -1.81
BRD4O60885 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.72□□□□□ -1.81
BRD4O60885 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.72□□□□□ -1.81
BRD4O60885 MTND2P16-201ENST00000419987 799 ntBASIC3.72□□□□□ -1.81
BRD4O60885 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.72□□□□□ -1.81
BRD4O60885 AC093151.1-201ENST00000427711 313 ntBASIC3.72□□□□□ -1.81
BRD4O60885 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.72□□□□□ -1.81
BRD4O60885 AP001960.1-201ENST00000506494 658 ntBASIC3.72□□□□□ -1.81
BRD4O60885 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.72□□□□□ -1.81
BRD4O60885 AL133271.1-201ENST00000538229 291 ntBASIC3.72□□□□□ -1.81
BRD4O60885 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.72□□□□□ -1.81
BRD4O60885 AC008277.2-201ENST00000605196 797 ntBASIC3.72□□□□□ -1.81
BRD4O60885 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
BRD4O60885 AC108206.1-201ENST00000570186 4159 ntBASIC3.72□□□□□ -1.81
BRD4O60885 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
BRD4O60885 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.71□□□□□ -1.82
BRD4O60885 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.71□□□□□ -1.82
BRD4O60885 SNORA7.2-201ENST00000364446 145 ntBASIC3.71□□□□□ -1.82
BRD4O60885 RNU2-6P-201ENST00000411404 190 ntBASIC3.71□□□□□ -1.82
BRD4O60885 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.71□□□□□ -1.82
BRD4O60885 DPPA2P1-201ENST00000428060 556 ntBASIC3.71□□□□□ -1.82
BRD4O60885 AC112220.1-201ENST00000434628 355 ntBASIC3.71□□□□□ -1.82
BRD4O60885 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.71□□□□□ -1.82
BRD4O60885 HMGB1P45-201ENST00000435986 653 ntBASIC3.71□□□□□ -1.82
BRD4O60885 AL031663.1-201ENST00000437445 219 ntBASIC3.71□□□□□ -1.82
BRD4O60885 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.71□□□□□ -1.82
BRD4O60885 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.71□□□□□ -1.82
BRD4O60885 AC091179.1-201ENST00000461606 579 ntBASIC3.71□□□□□ -1.82
BRD4O60885 AC012181.1-201ENST00000479895 423 ntBASIC3.71□□□□□ -1.82
BRD4O60885 AC103975.1-201ENST00000482506 483 ntBASIC3.71□□□□□ -1.82
BRD4O60885 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.71□□□□□ -1.82
BRD4O60885 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.71□□□□□ -1.82
BRD4O60885 AC008549.1-201ENST00000512900 643 ntBASIC3.71□□□□□ -1.82
BRD4O60885 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.71□□□□□ -1.82
BRD4O60885 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.71□□□□□ -1.82
BRD4O60885 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.71□□□□□ -1.82
BRD4O60885 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.71□□□□□ -1.82
BRD4O60885 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BRD4O60885 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
BRD4O60885 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
BRD4O60885 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
BRD4O60885 RNU6-1251P-201ENST00000364502 107 ntBASIC3.7□□□□□ -1.82
BRD4O60885 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.7□□□□□ -1.82
BRD4O60885 MTND4P11-201ENST00000417020 1058 ntBASIC3.7□□□□□ -1.82
BRD4O60885 AL390023.1-201ENST00000428836 262 ntBASIC3.7□□□□□ -1.82
BRD4O60885 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.7□□□□□ -1.82
BRD4O60885 AC023347.2-201ENST00000433994 462 ntBASIC3.7□□□□□ -1.82
BRD4O60885 ELOCP11-201ENST00000436690 332 ntBASIC3.7□□□□□ -1.82
BRD4O60885 ELOCP16-201ENST00000444494 332 ntBASIC3.7□□□□□ -1.82
BRD4O60885 MRPL50P4-201ENST00000446432 475 ntBASIC3.7□□□□□ -1.82
BRD4O60885 RPL23AP31-201ENST00000456160 467 ntBASIC3.7□□□□□ -1.82
BRD4O60885 ARPC3P2-201ENST00000457786 533 ntBASIC3.7□□□□□ -1.82
BRD4O60885 AC017007.3-201ENST00000479865 435 ntBASIC3.7□□□□□ -1.82
BRD4O60885 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BRD4O60885 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.7□□□□□ -1.82
BRD4O60885 AC109329.2-201ENST00000519658 482 ntBASIC3.7□□□□□ -1.82
BRD4O60885 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.7□□□□□ -1.82
BRD4O60885 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.7□□□□□ -1.82
BRD4O60885 FRG1DP-201ENST00000635586 771 ntBASIC3.7□□□□□ -1.82
BRD4O60885 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BRD4O60885 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.7□□□□□ -1.82
BRD4O60885 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
BRD4O60885 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
BRD4O60885 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
BRD4O60885 AC117529.2-201ENST00000512159 2068 ntBASIC3.69□□□□□ -1.82
BRD4O60885 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BRD4O60885 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BRD4O60885 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.69□□□□□ -1.82
BRD4O60885 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
BRD4O60885 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.69□□□□□ -1.82
BRD4O60885 snoU13.15-201ENST00000459407 104 ntBASIC3.69□□□□□ -1.82
BRD4O60885 RPL7P5-201ENST00000471472 736 ntBASIC3.69□□□□□ -1.82
BRD4O60885 VN1R17P-201ENST00000472048 1090 ntBASIC3.69□□□□□ -1.82
BRD4O60885 RPL9P33-201ENST00000484311 566 ntBASIC3.69□□□□□ -1.82
BRD4O60885 ANXA2P1-201ENST00000505539 926 ntBASIC3.69□□□□□ -1.82
BRD4O60885 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms