Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
SDCBPO00560 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SDCBPO00560 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
SDCBPO00560 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
SDCBPO00560 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
SDCBPO00560 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
SDCBPO00560 AP001350.1-201ENST00000601906 1524 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SDCBPO00560 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SDCBPO00560 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
SDCBPO00560 AC080100.1-201ENST00000624239 5356 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.26□□□□□ -2.05
SDCBPO00560 UBA52P6-201ENST00000399822 382 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 EIF5P1-201ENST00000400019 1231 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SDCBPO00560 RNU4-74P-201ENST00000411280 161 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 SSXP9-201ENST00000417503 292 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 AL645937.1-202ENST00000421799 937 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.26□□□□□ -2.05
SDCBPO00560 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SDCBPO00560 OR6K1P-201ENST00000456766 971 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 RPL21P104-201ENST00000464143 478 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 HMGN2P13-201ENST00000476476 274 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 AC090525.1-201ENST00000479116 478 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.26□□□□□ -2.05
SDCBPO00560 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.26□□□□□ -2.05
SDCBPO00560 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.26□□□□□ -2.05
SDCBPO00560 HMGB1P22-201ENST00000505315 124 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SDCBPO00560 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.26□□□□□ -2.05
SDCBPO00560 MTCO2P32-201ENST00000514865 403 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.26□□□□□ -2.05
SDCBPO00560 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.26□□□□□ -2.05
SDCBPO00560 AC008676.3-201ENST00000521237 435 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 AC010306.1-201ENST00000523223 1117 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.26□□□□□ -2.05
SDCBPO00560 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.26□□□□□ -2.05
SDCBPO00560 OR7K1P-201ENST00000546439 926 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.26□□□□□ -2.05
SDCBPO00560 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.26□□□□□ -2.05
SDCBPO00560 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.26□□□□□ -2.05
SDCBPO00560 AC073111.2-201ENST00000605657 1075 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 AC093732.2-201ENST00000607950 274 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.26□□□□□ -2.05
SDCBPO00560 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.26□□□□□ -2.05
SDCBPO00560 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.26□□□□□ -2.05
SDCBPO00560 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SDCBPO00560 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 AC073055.1-201ENST00000456901 1621 ntBASIC2.26□□□□□ -2.05
SDCBPO00560 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.26□□□□□ -2.05
SDCBPO00560 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.26□□□□□ -2.05
SDCBPO00560 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
SDCBPO00560 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.25□□□□□ -2.05
SDCBPO00560 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SDCBPO00560 GNG5P1-201ENST00000255500 204 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 MIR208A-201ENST00000362287 71 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 RNU4-23P-201ENST00000362839 140 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 RNU1-101P-201ENST00000391171 127 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 DHFRP5-201ENST00000406944 564 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 AC109583.1-201ENST00000432156 268 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 AC087499.2-201ENST00000432861 149 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 AC112220.1-201ENST00000434628 355 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 RPL17P49-201ENST00000443728 411 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.25□□□□□ -2.05
SDCBPO00560 AC104689.1-201ENST00000473356 768 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 SRIP1-201ENST00000489235 288 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.25□□□□□ -2.05
SDCBPO00560 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SDCBPO00560 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SDCBPO00560 AC093770.1-201ENST00000511559 571 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.25□□□□□ -2.05
SDCBPO00560 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.25□□□□□ -2.05
SDCBPO00560 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.25□□□□□ -2.05
SDCBPO00560 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.25□□□□□ -2.05
SDCBPO00560 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.25□□□□□ -2.05
SDCBPO00560 AC074029.1-201ENST00000552531 1044 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 MIR4635-201ENST00000583759 79 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 MIMT1-201ENST00000597105 1050 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 MTCO3P22-201ENST00000603219 784 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.25□□□□□ -2.05
SDCBPO00560 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.25□□□□□ -2.05
SDCBPO00560 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.25□□□□□ -2.05
SDCBPO00560 AL390240.1-201ENST00000612950 384 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.25□□□□□ -2.05
SDCBPO00560 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
SDCBPO00560 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SDCBPO00560 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.25□□□□□ -2.05
SDCBPO00560 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.25□□□□□ -2.05
SDCBPO00560 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.25□□□□□ -2.05
SDCBPO00560 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
SDCBPO00560 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
SDCBPO00560 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SDCBPO00560 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.24□□□□□ -2.05
SDCBPO00560 AL645568.2-201ENST00000432815 1337 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 SNORA25.6-201ENST00000364121 118 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 DEFB109C-201ENST00000382575 264 ntBASIC2.24□□□□□ -2.05
SDCBPO00560 DEFB109B-201ENST00000382656 264 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms