Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 MIR1178-201ENST00000408396 91 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 EEF1B2P6-201ENST00000445713 673 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 RPL30P15-201ENST00000457129 321 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 RNU7-59P-201ENST00000459101 61 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 RN7SL814P-201ENST00000487715 300 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 MTCYBP40-201ENST00000509390 1135 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 PTP4A1P4-201ENST00000512479 322 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 COX6CP5-201ENST00000527162 228 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AC051619.2-201ENST00000559063 397 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AC022884.2-201ENST00000578535 580 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 OR7E18P-201ENST00000592589 702 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AC012616.1-201ENST00000600294 197 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AP000654.2-201ENST00000605633 586 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AC113194.1-201ENST00000606037 500 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AC133644.2-201ENST00000608142 540 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AC090425.1-201ENST00000610007 140 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AL390240.1-201ENST00000612950 384 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AC133104.2-201ENST00000615272 193 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 MIR6864-201ENST00000617935 70 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AL450345.1-202ENST00000605741 3881 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC121333.1-201ENST00000567488 2709 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 Y_RNA.112-201ENST00000363250 102 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 RN7SKP124-201ENST00000364730 341 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 FABP5P14-201ENST00000437273 393 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 RPL21P133-201ENST00000443666 476 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 MRPS31P2-201ENST00000451581 518 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 BTF3P15-201ENST00000455606 336 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC079168.1-201ENST00000458741 345 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC092754.1-201ENST00000472975 479 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AL135752.1-201ENST00000479477 471 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC009902.1-201ENST00000519351 183 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 IGLV2-28-201ENST00000520681 304 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AL117187.1-201ENST00000555482 181 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC110588.1-201ENST00000559699 137 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 MIR1273E-201ENST00000581165 102 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 RN7SL356P-201ENST00000582228 248 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 BNIP3P25-201ENST00000596023 559 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 VN1R107P-201ENST00000601784 209 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC022893.3-201ENST00000607665 437 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC090510.2-201ENST00000617465 629 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 LINC01963-201ENST00000562038 3148 ntBASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SALL4Q9UJQ4 AC091046.3-201ENST00000631455 1574 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms