Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.5□□□□□ -2.01
CCDC88CQ9P219 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC88CQ9P219 AC078899.3-201ENST00000599065 212 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 AL627309.6-201ENST00000606857 840 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 AC010149.2-201ENST00000637608 315 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC88CQ9P219 AC007336.1-201ENST00000576365 3828 ntBASIC2.5□□□□□ -2.01
CCDC88CQ9P219 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 DHFRP5-201ENST00000406944 564 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 AL031736.2-201ENST00000426573 787 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 MYL8P-204ENST00000431574 518 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 ACTR6P1-201ENST00000514311 1104 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 MAGOH2P-202ENST00000584384 429 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 AC026790.2-201ENST00000606282 430 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 AC005858.4-201ENST00000623191 700 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 AC002546.1-201ENST00000588041 2504 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 SAR1AP2-201ENST00000392696 594 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 AL139095.1-201ENST00000404326 391 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 AL606490.7-201ENST00000433136 191 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 RPL31P20-201ENST00000449593 360 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 RPL7P5-201ENST00000471472 736 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 AC004924.1-201ENST00000480160 781 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 RN7SL499P-201ENST00000481141 276 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 OR6C73P-201ENST00000546432 358 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 PCNAP1-202ENST00000595299 752 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 AC117490.2-201ENST00000610042 594 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.49□□□□□ -2.01
CCDC88CQ9P219 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CCDC88CQ9P219 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC88CQ9P219 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.48□□□□□ -2.01
CCDC88CQ9P219 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC88CQ9P219 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC88CQ9P219 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.48□□□□□ -2.01
CCDC88CQ9P219 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC88CQ9P219 CCNHP1-201ENST00000513311 678 ntBASIC2.48□□□□□ -2.01
CCDC88CQ9P219 RNA5SP320-201ENST00000516263 124 ntBASIC2.48□□□□□ -2.01
CCDC88CQ9P219 RNU6-826P-201ENST00000516827 104 ntBASIC2.48□□□□□ -2.01
CCDC88CQ9P219 SEC11B-201ENST00000518383 499 ntBASIC2.48□□□□□ -2.01
CCDC88CQ9P219 SERPINE4P-201ENST00000554978 281 ntBASIC2.48□□□□□ -2.01
CCDC88CQ9P219 AC121761.2-201ENST00000617300 689 ntBASIC2.48□□□□□ -2.01
CCDC88CQ9P219 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
CCDC88CQ9P219 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC88CQ9P219 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC88CQ9P219 AL049780.3-201ENST00000624612 1583 ntBASIC2.48□□□□□ -2.01
CCDC88CQ9P219 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CCDC88CQ9P219 CUL1P1-201ENST00000509510 2425 ntBASIC2.48□□□□□ -2.01
CCDC88CQ9P219 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC88CQ9P219 AC092447.7-201ENST00000422212 1621 ntBASIC2.48□□□□□ -2.01
CCDC88CQ9P219 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC88CQ9P219 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC88CQ9P219 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AL590004.2-201ENST00000404787 371 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 RPS20P25-201ENST00000412447 352 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AL392003.1-201ENST00000434394 243 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 RPL23AP31-201ENST00000456160 467 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AC128713.1-201ENST00000471495 306 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 RPS27P27-201ENST00000498779 255 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 OR4A45P-201ENST00000529954 901 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 HPRT1P3-201ENST00000539521 576 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 MTND4LP24-201ENST00000572277 291 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 MIR4635-201ENST00000583759 79 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AL391834.1-201ENST00000609609 560 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AC105429.2-201ENST00000610567 517 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AC073348.1-201ENST00000623002 331 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 AC009487.2-201ENST00000420969 6821 ntBASIC2.47□□□□□ -2.01
CCDC88CQ9P219 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.47□□□□□ -2.01
CCDC88CQ9P219 MIR592-201ENST00000384959 97 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms