Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AL645937.3-201ENST00000453647 936 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AL591473.1-201ENST00000464297 313 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 RPL7P22-201ENST00000466005 733 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 RN7SL319P-201ENST00000480656 221 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AC004453.1-201ENST00000487895 408 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AC008953.1-201ENST00000497334 318 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AC110792.2-201ENST00000510278 224 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AC107934.1-201ENST00000522215 217 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AC022616.3-201ENST00000523940 148 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 EDDM3DP-201ENST00000554692 434 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AC044860.2-201ENST00000561005 179 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 TVP23CP2-201ENST00000571473 623 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 MIR5186-201ENST00000577504 120 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AC011487.3-201ENST00000593607 453 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 BBIP1P1-201ENST00000602999 279 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AP005432.2-201ENST00000608162 586 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 OR10AB1P-201ENST00000609613 938 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 MIR7155-201ENST00000615925 56 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AC068870.2-201ENST00000620635 389 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AC018445.2-201ENST00000622987 260 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AL356585.4-201ENST00000623078 1229 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AC091905.4-201ENST00000623432 202 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AC063976.2-201ENST00000425667 3556 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 AL049780.3-201ENST00000624612 1583 ntBASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PARPBPQ9NWS1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
PARPBPQ9NWS1 AC092162.3-201ENST00000624511 1624 ntBASIC4.46□□□□□ -1.69
PARPBPQ9NWS1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PARPBPQ9NWS1 AC090971.4-201ENST00000560291 1800 ntBASIC4.46□□□□□ -1.69
PARPBPQ9NWS1 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.46□□□□□ -1.69
PARPBPQ9NWS1 AL672167.1-204ENST00000641875 3017 ntBASIC4.46□□□□□ -1.69
PARPBPQ9NWS1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 AC015813.6-201ENST00000624409 5808 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 RNU6-1120P-201ENST00000362988 108 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 SNORA74A-201ENST00000364089 198 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 RNU6-444P-201ENST00000383988 108 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 MIR1-2-201ENST00000384961 85 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 RNU2-8P-201ENST00000410727 190 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 PRELID3BP11-201ENST00000414230 479 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 NDUFB4P5-201ENST00000415445 361 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 AC013429.2-201ENST00000418798 781 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 AC048351.1-201ENST00000420064 602 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 AP000936.3-201ENST00000438127 255 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 PRPF38AP2-201ENST00000438179 851 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 RPS29P9-201ENST00000440360 171 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 BRK1P2-201ENST00000442875 223 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 RPL36AP15-201ENST00000444514 266 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 AC243772.1-201ENST00000451620 410 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 AC005229.2-201ENST00000456995 399 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 AC010301.1-201ENST00000473936 355 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 MIR4646-201ENST00000580775 63 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 AC021646.1-201ENST00000605469 484 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 uc_338.5-201ENST00000611839 155 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 ASNSP1-201ENST00000518311 1939 ntBASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PARPBPQ9NWS1 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.45□□□□□ -1.7
PARPBPQ9NWS1 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms