Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 UBDP1-202ENST00000457888 382 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 RPL35P6-201ENST00000490024 372 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 AC004980.4-201ENST00000513375 203 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 AC012339.2-201ENST00000523996 453 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 AC024940.3-201ENST00000538551 316 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 PDCD5P1-201ENST00000543528 309 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 AC087477.6-201ENST00000559595 843 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 KC877982.1-201ENST00000602313 470 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 AL031176.1-201ENST00000604554 466 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 IGHV3-29-201ENST00000604817 344 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 EIF3FP1-201ENST00000613970 806 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 uc_338.12-201ENST00000616344 181 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 AL356585.4-201ENST00000623078 1229 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 AP006248.2-201ENST00000623309 592 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 MIR6715B-201ENST00000637172 77 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 AL672167.1-203ENST00000641299 2975 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 MAPK10-320ENST00000641462 6696 ntBASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCM2LQ9NUG4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 OR51H2P-202ENST00000641424 3046 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 MTCO1P9-201ENST00000505577 1534 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 RNU6-1283P-201ENST00000365314 105 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 MIR19A-201ENST00000384878 82 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 SNORD115-47-201ENST00000391226 86 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 HMGN1P24-201ENST00000412282 298 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 ELOCP4-201ENST00000420090 333 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 TIMM9P1-201ENST00000436122 256 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC004938.1-201ENST00000438468 308 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC093156.1-201ENST00000440382 670 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC132479.1-201ENST00000449160 144 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AL121769.1-201ENST00000469473 401 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 RN7SL459P-201ENST00000481078 302 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 RPS3AP14-201ENST00000483907 780 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC023194.1-201ENST00000493084 308 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC008897.1-201ENST00000494006 347 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC019235.1-201ENST00000503847 207 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC093824.1-201ENST00000508796 343 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 FTH1P21-201ENST00000512179 511 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC105233.3-201ENST00000531125 744 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 CR383656.7-201ENST00000548164 174 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC006504.3-201ENST00000586818 523 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC068790.5-201ENST00000602741 355 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC006254.3-201ENST00000603353 884 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AL139286.1-201ENST00000604465 483 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC091979.2-201ENST00000607514 214 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AL161637.1-201ENST00000622380 412 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AC091905.1-201ENST00000624400 311 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 MIR7641-1-201ENST00000627518 61 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 SCN1A-220ENST00000641603 12506 ntBASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCM2LQ9NUG4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms