Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHB16Q9NRJ7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHB16Q9NRJ7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
PCDHB16Q9NRJ7 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.84□□□□□ -1.8
PCDHB16Q9NRJ7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHB16Q9NRJ7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 CPHL1P-201ENST00000461341 3407 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 Y_RNA.97-201ENST00000363094 102 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 RNA5SP322-201ENST00000363617 119 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 RN7SKP103-201ENST00000363848 320 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 RNU6-1074P-201ENST00000383995 104 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 RNU1-89P-201ENST00000384592 164 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 RSU1P3-201ENST00000412878 835 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 MTCO1P39-201ENST00000426148 480 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 VDAC1P3-201ENST00000434069 851 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 LARP1BP3-201ENST00000437229 869 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 RPL7P36-201ENST00000444633 681 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AC010655.1-201ENST00000449336 292 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 BNIP3P41-201ENST00000503774 571 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 NDUFA5P12-201ENST00000503796 343 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AC021146.1-201ENST00000511202 716 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AC022483.1-201ENST00000514020 567 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 RNA5SP309-201ENST00000516670 106 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 RNU6-1003P-201ENST00000517099 105 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 RNU6-1073P-201ENST00000517182 106 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AC012435.1-202ENST00000568772 240 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AF131215.7-201ENST00000602443 707 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 MIR6853-201ENST00000619642 74 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AL356266.1-201ENST00000623311 483 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AC091931.1-201ENST00000623488 728 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AC007494.3-201ENST00000624660 743 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AC006065.6-201ENST00000625201 545 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB16Q9NRJ7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 CR381670.1-201ENST00000624291 1693 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 TAB3P1-202ENST00000452645 1634 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 CCT4P2-201ENST00000233836 1548 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 ZNF833P-201ENST00000424938 1494 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 MTND5P33-201ENST00000571250 1450 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 RNU6-853P-201ENST00000364306 107 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 MIR135A2-201ENST00000384854 100 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 RNU11-4P-201ENST00000391149 133 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 AL136372.1-201ENST00000403060 228 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 RNU2-37P-201ENST00000410695 177 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 RNU2-71P-201ENST00000411395 189 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 RPS23P10-201ENST00000416185 486 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 AC119751.6-201ENST00000416712 186 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 OR8F1P-201ENST00000425243 930 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 USP9YP9-201ENST00000429406 715 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 AC098826.1-201ENST00000433943 471 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 HMGB3P22-202ENST00000451823 572 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 AC013356.1-201ENST00000489027 564 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 AL139099.1-201ENST00000497398 403 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 AC110775.1-201ENST00000513721 462 ntBASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHB16Q9NRJ7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms