Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AL391684.1-202ENST00000641293 1636 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 RNA5SP391-201ENST00000363456 119 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 SNORD8-201ENST00000363915 110 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 RPL31P2-201ENST00000413849 377 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AC006946.1-201ENST00000429106 328 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 LINC00328-2P-201ENST00000436585 219 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 RN7SL39P-201ENST00000462264 297 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 RPL30P10-201ENST00000488148 337 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 RPL7P47-201ENST00000497299 556 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AP005639.1-201ENST00000526939 192 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AL442163.3-201ENST00000554110 156 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 MT1CP-201ENST00000567054 174 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AC022884.2-201ENST00000578535 580 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 MIR3144-201ENST00000579460 79 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AC063977.7-201ENST00000594454 337 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AC025588.3-201ENST00000604182 274 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 TNPO1P2-201ENST00000426249 2665 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AC092747.4-201ENST00000620519 1861 ntBASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 Y_RNA.76-201ENST00000362931 109 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 RNU6-371P-201ENST00000364283 108 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 Y_RNA.240-201ENST00000364469 95 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 MIR92A2-201ENST00000385299 75 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 RNU6-817P-201ENST00000391083 104 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 AP003170.5-201ENST00000397185 335 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 U3.43-201ENST00000410734 213 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 RPL21P50-201ENST00000417698 477 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 RPL7AP51-201ENST00000422016 760 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 AL031659.1-201ENST00000447075 539 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 ISCUP1-201ENST00000454451 448 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 RN7SL643P-201ENST00000471845 291 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 HMGN2P13-201ENST00000476476 274 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 AC098818.1-201ENST00000478593 252 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 SCARNA24.2-201ENST00000516968 130 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 RN7SKP60-201ENST00000516985 239 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 AC116917.1-201ENST00000520558 305 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 IGHV4-55-201ENST00000520889 368 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 SYF2P1-201ENST00000550658 413 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 TRAV32-201ENST00000553993 340 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 RPL21P7-201ENST00000557463 483 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 MIR5696-201ENST00000578474 85 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 LRRC37A5P-203ENST00000580181 585 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 Z95114.1-201ENST00000624264 14574 ntBASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.06□□□□□ -1.44
PRDM9Q9NQV7 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.05□□□□□ -1.44
PRDM9Q9NQV7 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms