Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 MIR3939-201ENST00000582614 106 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 KPNA2P3-201ENST00000584190 848 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 GAS5-AS1-201ENST00000602767 694 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AC010591.1-201ENST00000603941 649 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AP003122.5-201ENST00000527668 3766 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AL645568.2-201ENST00000432815 1337 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 RNU6-50P-201ENST00000362356 103 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 RNU6-468P-201ENST00000384003 109 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 SNORD3H-201ENST00000384486 214 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 FO393414.1-201ENST00000428697 1184 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 RPL21P89-201ENST00000444021 467 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 SSXP4-201ENST00000451349 245 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 ELOCP23-201ENST00000452014 332 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AL590639.1-201ENST00000456484 337 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 RPS27AP9-201ENST00000477681 438 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 RN7SL459P-201ENST00000481078 302 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AC004062.1-201ENST00000509926 645 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 RN7SKP13-201ENST00000515933 244 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 RNU1-61P-201ENST00000516107 151 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 RNU6-885P-201ENST00000516607 104 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AC034205.1-201ENST00000520621 638 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 ELOCP31-201ENST00000540463 467 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AC093510.2-201ENST00000562820 896 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AC010653.1-201ENST00000571108 881 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AL451074.6-201ENST00000608512 729 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 VIS1.1-201ENST00000610517 203 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AC006329.2-201ENST00000611491 394 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AL390240.1-201ENST00000612950 384 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AC009318.4-201ENST00000620496 486 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AC006378.2-201ENST00000623178 2476 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 AC111188.2-201ENST00000529697 1387 ntBASIC2.7□□□□□ -1.98
SLIRPQ9GZT3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 AL121657.1-201ENST00000327215 531 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 MIR372-201ENST00000362225 67 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 RNU6-839P-201ENST00000363347 108 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 U8.11-201ENST00000384699 133 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 U8.12-201ENST00000384701 133 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 RPL26P29-201ENST00000415623 438 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 AC108734.1-201ENST00000439549 399 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 RBMY2UP-201ENST00000453474 324 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 U8.18-201ENST00000459285 133 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 RN7SL385P-201ENST00000468873 276 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 AC012181.1-201ENST00000479895 423 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 RPL21P13-201ENST00000488305 481 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 RPL7P38-201ENST00000488396 739 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 RN7SKP282-201ENST00000516824 299 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 RPL12P22-201ENST00000519073 490 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 ZNF971P-201ENST00000562068 1249 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 SULT1C2P1-202ENST00000562418 459 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 AC034105.3-201ENST00000565294 442 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 AC093519.1-201ENST00000566109 298 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 MIR4474-201ENST00000579189 78 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 RN7SL339P-201ENST00000580597 296 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 AC104785.1-201ENST00000603220 588 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 RPAP2P1-201ENST00000603626 1168 ntBASIC2.69□□□□□ -1.98
SLIRPQ9GZT3 AL023583.1-201ENST00000607518 1143 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms