Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AC026784.1-201ENST00000507986 352 ntBASIC4.15□□□□□ -1.75
NEK1Q96PY6 PCBP2P3-201ENST00000509726 843 ntBASIC4.15□□□□□ -1.75
NEK1Q96PY6 AC021146.1-201ENST00000511202 716 ntBASIC4.15□□□□□ -1.75
NEK1Q96PY6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AC037471.2-201ENST00000564941 598 ntBASIC4.15□□□□□ -1.75
NEK1Q96PY6 ZNF192P1-203ENST00000565888 810 ntBASIC4.15□□□□□ -1.75
NEK1Q96PY6 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 MIR5195-201ENST00000583555 115 ntBASIC4.15□□□□□ -1.75
NEK1Q96PY6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 ELOCP35-201ENST00000604289 336 ntBASIC4.15□□□□□ -1.75
NEK1Q96PY6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 U6.98-201ENST00000637157 84 ntBASIC4.15□□□□□ -1.75
NEK1Q96PY6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NEK1Q96PY6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NEK1Q96PY6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NEK1Q96PY6 RPS4XP5-202ENST00000449995 1334 ntBASIC4.15□□□□□ -1.75
NEK1Q96PY6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
NEK1Q96PY6 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NEK1Q96PY6 AP001148.1-201ENST00000624124 2359 ntBASIC4.14□□□□□ -1.75
NEK1Q96PY6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
NEK1Q96PY6 MFSD8-233ENST00000641482 4860 ntBASIC4.14□□□□□ -1.75
NEK1Q96PY6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NEK1Q96PY6 RNU6-1300P-201ENST00000391046 108 ntBASIC4.14□□□□□ -1.75
NEK1Q96PY6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NEK1Q96PY6 Z92545.1-201ENST00000411782 234 ntBASIC4.14□□□□□ -1.75
NEK1Q96PY6 BOLA3P4-201ENST00000418151 400 ntBASIC4.14□□□□□ -1.75
NEK1Q96PY6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.14□□□□□ -1.75
NEK1Q96PY6 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 AL357552.1-201ENST00000445254 415 ntBASIC4.14□□□□□ -1.75
NEK1Q96PY6 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NEK1Q96PY6 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 RN7SL293P-201ENST00000481765 281 ntBASIC4.14□□□□□ -1.75
NEK1Q96PY6 AC106707.2-201ENST00000484182 374 ntBASIC4.14□□□□□ -1.75
NEK1Q96PY6 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 AC093519.1-201ENST00000566109 298 ntBASIC4.14□□□□□ -1.75
NEK1Q96PY6 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
NEK1Q96PY6 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.14□□□□□ -1.75
NEK1Q96PY6 AL353746.1-201ENST00000566293 6881 ntBASIC4.14□□□□□ -1.75
NEK1Q96PY6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NEK1Q96PY6 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NEK1Q96PY6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
NEK1Q96PY6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NEK1Q96PY6 AL079305.1-201ENST00000623159 3008 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 RNU6-1243P-201ENST00000364028 107 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.13□□□□□ -1.75
NEK1Q96PY6 HSPE1P26-201ENST00000405341 275 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 MIR1250-201ENST00000408098 113 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 RPL31P2-201ENST00000413849 377 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.13□□□□□ -1.75
NEK1Q96PY6 FCF1P2-201ENST00000415284 583 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.13□□□□□ -1.75
NEK1Q96PY6 AC007435.1-201ENST00000421086 415 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.13□□□□□ -1.75
NEK1Q96PY6 AP000907.1-201ENST00000428428 510 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.13□□□□□ -1.75
NEK1Q96PY6 PTENP1-201ENST00000447117 1215 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.13□□□□□ -1.75
NEK1Q96PY6 OFD1P3Y-201ENST00000453312 783 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 AC087879.1-201ENST00000474343 374 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.13□□□□□ -1.75
NEK1Q96PY6 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NEK1Q96PY6 AP000563.1-201ENST00000490865 758 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.13□□□□□ -1.75
NEK1Q96PY6 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.13□□□□□ -1.75
NEK1Q96PY6 WBP1LP4-201ENST00000505043 344 ntBASIC4.13□□□□□ -1.75
NEK1Q96PY6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.13□□□□□ -1.75
NEK1Q96PY6 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.13□□□□□ -1.75
NEK1Q96PY6 AC005921.1-201ENST00000510589 286 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms