Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MTCO2P27-201ENST00000420740 428 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 RPL37P1-201ENST00000432310 284 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 BX323845.1-201ENST00000432417 179 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AC027575.1-201ENST00000481064 460 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 MRPS33P2-201ENST00000507850 322 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 SUB1P1-201ENST00000524415 382 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AL359219.2-201ENST00000555184 348 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 MIR4429-201ENST00000580105 73 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AC008638.3-201ENST00000603341 463 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 AL391813.2-201ENST00000609113 322 ntBASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNGAP1Q96PV0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC020633.1-201ENST00000468439 2247 ntBASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 RN7SKP100-201ENST00000411258 284 ntBASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC008280.1-201ENST00000418851 412 ntBASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 RPL36AP15-201ENST00000444514 266 ntBASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 MTCO3P2-201ENST00000457365 171 ntBASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 MTND5P16-201ENST00000460269 1703 ntBASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC006967.1-201ENST00000467608 589 ntBASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC090096.1-201ENST00000489168 390 ntBASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 RN7SKP256-201ENST00000517201 314 ntBASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AL512782.1-201ENST00000603093 364 ntBASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC010591.1-201ENST00000603941 649 ntBASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC106900.2-201ENST00000604994 317 ntBASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC103710.3-201ENST00000608157 948 ntBASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 AC084781.2-201ENST00000615568 161 ntBASIC5.73□□□□□ -1.49
SYNGAP1Q96PV0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 KPNA2P2-201ENST00000419546 1489 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 MAPK10-304ENST00000641341 3984 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 RNU6-1097P-201ENST00000363586 107 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 Y_RNA.255-201ENST00000364581 97 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 RNU6-996P-201ENST00000365438 107 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 RNU6-108P-201ENST00000365558 107 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 OR1L6-202ENST00000373684 1044 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 RNU6-43P-201ENST00000384302 107 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AL136116.1-201ENST00000403591 381 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AC093414.1-201ENST00000434712 514 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AL138799.3-201ENST00000438968 350 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 APOOP2-201ENST00000461561 539 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AC007547.1-201ENST00000462177 490 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 PPIAP21-201ENST00000464473 501 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AC090453.1-201ENST00000495560 436 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 RPL38P4-201ENST00000502376 214 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AC016559.2-201ENST00000510759 359 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AC107934.1-201ENST00000522215 217 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AP000907.2-201ENST00000530827 353 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 FRG2DP-202ENST00000566967 323 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms