Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC7Q96M83 AC012254.4-201ENST00000588843 273 ntBASIC3.94□□□□□ -1.78
CCDC7Q96M83 AC007619.2-201ENST00000605743 379 ntBASIC3.94□□□□□ -1.78
CCDC7Q96M83 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC7Q96M83 AL592437.2-201ENST00000421655 2434 ntBASIC3.93□□□□□ -1.78
CCDC7Q96M83 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC7Q96M83 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 AC092593.1-201ENST00000515413 1815 ntBASIC3.93□□□□□ -1.78
CCDC7Q96M83 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 RN7SKP44-201ENST00000363602 316 ntBASIC3.93□□□□□ -1.78
CCDC7Q96M83 EI24P2-201ENST00000397776 1076 ntBASIC3.93□□□□□ -1.78
CCDC7Q96M83 AL031679.1-201ENST00000400616 525 ntBASIC3.93□□□□□ -1.78
CCDC7Q96M83 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 AL035407.1-201ENST00000429211 571 ntBASIC3.93□□□□□ -1.78
CCDC7Q96M83 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 RPL21P71-201ENST00000465598 459 ntBASIC3.93□□□□□ -1.78
CCDC7Q96M83 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 AC017037.2-201ENST00000513850 890 ntBASIC3.93□□□□□ -1.78
CCDC7Q96M83 SCGB1D5P-201ENST00000515134 247 ntBASIC3.93□□□□□ -1.78
CCDC7Q96M83 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 SNORA70.14-201ENST00000516205 110 ntBASIC3.93□□□□□ -1.78
CCDC7Q96M83 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 AC079600.2-201ENST00000550076 130 ntBASIC3.93□□□□□ -1.78
CCDC7Q96M83 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 MIR4435-1-201ENST00000582552 80 ntBASIC3.93□□□□□ -1.78
CCDC7Q96M83 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 AC012119.1-201ENST00000603184 222 ntBASIC3.93□□□□□ -1.78
CCDC7Q96M83 AC067852.7-201ENST00000623270 535 ntBASIC3.93□□□□□ -1.78
CCDC7Q96M83 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CCDC7Q96M83 AC005183.1-201ENST00000603687 1979 ntBASIC3.93□□□□□ -1.78
CCDC7Q96M83 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCDC7Q96M83 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC7Q96M83 RNU2-6P-201ENST00000411404 190 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC7Q96M83 AL158825.1-201ENST00000414735 521 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC7Q96M83 AC087499.2-201ENST00000432861 149 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 RPS7P5-201ENST00000441482 581 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 AL592437.1-201ENST00000443781 492 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC7Q96M83 RPL21P18-201ENST00000469899 480 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 AC022790.1-201ENST00000522872 204 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 AP001207.1-201ENST00000524051 481 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 FAM60DP-201ENST00000524174 632 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 AP000857.1-201ENST00000532151 543 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CCDC7Q96M83 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC7Q96M83 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC7Q96M83 VN1R79P-201ENST00000593540 513 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 RMST_10.1-201ENST00000616309 154 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 AC231759.1-201ENST00000616455 597 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 AL163051.2-201ENST00000618976 735 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CCDC7Q96M83 AC010149.2-201ENST00000637608 315 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC7Q96M83 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.92□□□□□ -1.78
CCDC7Q96M83 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC7Q96M83 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CCDC7Q96M83 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC7Q96M83 RNA5SP27-201ENST00000363839 119 ntBASIC3.91□□□□□ -1.78
CCDC7Q96M83 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
CCDC7Q96M83 RNU4-27P-201ENST00000410889 139 ntBASIC3.91□□□□□ -1.78
CCDC7Q96M83 RNU2-72P-201ENST00000411175 163 ntBASIC3.91□□□□□ -1.78
CCDC7Q96M83 HMGB3P31-201ENST00000413333 595 ntBASIC3.91□□□□□ -1.78
CCDC7Q96M83 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC7Q96M83 RPL21P40-201ENST00000428586 483 ntBASIC3.91□□□□□ -1.78
CCDC7Q96M83 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.91□□□□□ -1.78
CCDC7Q96M83 AP001025.2-201ENST00000490908 477 ntBASIC3.91□□□□□ -1.78
CCDC7Q96M83 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC7Q96M83 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC7Q96M83 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CCDC7Q96M83 AC093331.1-201ENST00000521474 169 ntBASIC3.91□□□□□ -1.78
CCDC7Q96M83 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC7Q96M83 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC7Q96M83 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC7Q96M83 AC092474.3-201ENST00000603022 568 ntBASIC3.91□□□□□ -1.78
CCDC7Q96M83 Z99129.2-201ENST00000619967 314 ntBASIC3.91□□□□□ -1.78
CCDC7Q96M83 AC097460.3-201ENST00000623099 442 ntBASIC3.91□□□□□ -1.78
CCDC7Q96M83 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCDC7Q96M83 AC022031.1-201ENST00000585985 2593 ntBASIC3.91□□□□□ -1.78
CCDC7Q96M83 AL049737.1-201ENST00000413920 1403 ntBASIC3.91□□□□□ -1.78
CCDC7Q96M83 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CCDC7Q96M83 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC7Q96M83 MIR16-2-201ENST00000362117 81 ntBASIC3.9□□□□□ -1.78
CCDC7Q96M83 RNA5SP432-201ENST00000362480 116 ntBASIC3.9□□□□□ -1.78
CCDC7Q96M83 RNU6-543P-201ENST00000362576 108 ntBASIC3.9□□□□□ -1.78
CCDC7Q96M83 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
CCDC7Q96M83 PTGES3P2-201ENST00000407942 482 ntBASIC3.9□□□□□ -1.78
CCDC7Q96M83 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC7Q96M83 AL592148.1-201ENST00000413568 445 ntBASIC3.9□□□□□ -1.78
CCDC7Q96M83 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms