Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 ZNF833P-201ENST00000424938 1494 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
C9orf72Q96LT7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
C9orf72Q96LT7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
C9orf72Q96LT7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 MIR128-1-201ENST00000384921 82 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 RNU6-796P-201ENST00000391086 107 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 SSXP10-201ENST00000402595 565 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 RNU4-78P-201ENST00000410940 126 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 AL024507.1-201ENST00000412741 274 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 AC093422.3-201ENST00000428506 305 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 RPL23AP69-201ENST00000431134 458 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 ZFAND6P1-201ENST00000434138 605 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 HIGD1AP11-201ENST00000438361 280 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 RPS27P23-201ENST00000487608 251 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 AC133963.2-201ENST00000513686 578 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 AP001207.1-201ENST00000524051 481 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 CR383656.14-201ENST00000551951 406 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 PRELID3BP8-201ENST00000604148 295 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 AC068620.4-201ENST00000636730 1182 ntBASIC3.15□□□□□ -1.91
C9orf72Q96LT7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
C9orf72Q96LT7 AL353743.1-202ENST00000431724 1695 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 OR1S2-201ENST00000302592 978 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 RNU6-1181P-201ENST00000384191 106 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 RNU6-1226P-201ENST00000384317 107 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 Y_RNA.493-201ENST00000384422 102 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 SNORA48.5-201ENST00000391143 135 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 ATP5F1P6-201ENST00000402768 767 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 NDUFB4P4-201ENST00000404822 243 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 AC096664.2-201ENST00000411843 406 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 OR2B8P-201ENST00000432841 938 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 AL353705.1-201ENST00000433468 480 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 ELOCP23-201ENST00000452014 332 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 AC104308.1-201ENST00000454621 333 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 RPS15AP1-201ENST00000457423 391 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 RPL21P41-201ENST00000459863 264 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 AC025181.1-201ENST00000477507 416 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 RPS3AP43-201ENST00000479743 781 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 AP004217.1-201ENST00000480579 346 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 MTCO2P32-201ENST00000514865 403 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 AC092470.1-201ENST00000546187 132 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 AC055876.1-202ENST00000567053 138 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 MIR4325-201ENST00000583049 90 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 AC113368.1-201ENST00000603736 382 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 FAM35CP-201ENST00000554755 2470 ntBASIC3.14□□□□□ -1.91
C9orf72Q96LT7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf72Q96LT7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
C9orf72Q96LT7 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
C9orf72Q96LT7 RNU6-1151P-201ENST00000384684 107 ntBASIC3.13□□□□□ -1.91
C9orf72Q96LT7 MIR525-201ENST00000384978 85 ntBASIC3.13□□□□□ -1.91
C9orf72Q96LT7 NDUFB4P5-201ENST00000415445 361 ntBASIC3.13□□□□□ -1.91
C9orf72Q96LT7 SDCBPP3-201ENST00000419629 891 ntBASIC3.13□□□□□ -1.91
C9orf72Q96LT7 PAICSP7-201ENST00000419829 962 ntBASIC3.13□□□□□ -1.91
C9orf72Q96LT7 AC114973.1-201ENST00000429057 632 ntBASIC3.13□□□□□ -1.91
C9orf72Q96LT7 AL671855.1-201ENST00000446875 1203 ntBASIC3.13□□□□□ -1.91
C9orf72Q96LT7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.13□□□□□ -1.91
C9orf72Q96LT7 AP001992.1-205ENST00000462248 379 ntBASIC3.13□□□□□ -1.91
C9orf72Q96LT7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.13□□□□□ -1.91
C9orf72Q96LT7 AC010285.1-201ENST00000470580 392 ntBASIC3.13□□□□□ -1.91
C9orf72Q96LT7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.13□□□□□ -1.91
C9orf72Q96LT7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf72Q96LT7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf72Q96LT7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf72Q96LT7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf72Q96LT7 AC011471.1-201ENST00000585766 187 ntBASIC3.13□□□□□ -1.91
C9orf72Q96LT7 AC021851.1-201ENST00000608537 1082 ntBASIC3.13□□□□□ -1.91
C9orf72Q96LT7 AC112503.2-201ENST00000609005 552 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms