Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 RPL32P34-201ENST00000486380 400 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AC020699.1-201ENST00000505161 445 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 RN7SKP277-201ENST00000516895 283 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AADACP1-206ENST00000561502 1193 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AC006557.5-201ENST00000603126 811 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AC098679.5-201ENST00000624394 571 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AL512506.2-201ENST00000624472 458 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 MIR4496-201ENST00000635896 61 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 FAM157B-203ENST00000639350 358 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 CEP170P1-201ENST00000502249 4587 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 DBF4P1-201ENST00000412976 1892 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 MTND5P31-201ENST00000419366 1374 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 MTND5P28-201ENST00000438005 1594 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 TNPO1P3-201ENST00000436471 2662 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 RNU6-492P-201ENST00000363035 104 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 RNU6-413P-201ENST00000384115 107 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 RNU6-921P-201ENST00000384361 107 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 MIR491-201ENST00000384877 84 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AL121978.1-201ENST00000402778 359 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 RPL23AP47-201ENST00000408017 460 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 MTCO3P1-205ENST00000422088 832 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 PSMA2P3-201ENST00000429685 675 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 BX276092.4-201ENST00000452056 248 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 MTCO3P16-201ENST00000454456 754 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 RPL9P32-201ENST00000464118 620 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 RPL7P38-201ENST00000488396 739 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 FCF1P3-201ENST00000496394 590 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AC021678.1-201ENST00000505195 936 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AC112198.1-201ENST00000505369 1220 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AC016065.2-201ENST00000514530 444 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 RNU6-311P-201ENST00000516224 102 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 SNORA70.24-201ENST00000517233 118 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AP001189.2-201ENST00000527320 189 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 OR8L1P-201ENST00000534005 955 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 UBE2NP1-201ENST00000545592 458 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 GTF2IP8-201ENST00000560687 584 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 MIR4738-201ENST00000579134 87 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 GAS5-AS1-201ENST00000602767 694 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 YWHAQP7-201ENST00000603536 658 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AC069545.1-201ENST00000605671 358 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AC016877.3-201ENST00000606778 504 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AC024257.5-201ENST00000612739 531 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 AL513302.2-201ENST00000562313 1842 ntBASIC3.77□□□□□ -1.81
CCDC60Q8IWA6 ELL2P4-201ENST00000446870 1376 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 BTBD10P2-201ENST00000404779 676 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 OR51AB1P-201ENST00000429046 620 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 CKS1BP5-201ENST00000434172 273 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 USP9YP22-201ENST00000438971 294 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 EXTL2P1-201ENST00000446218 416 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms