Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC135068.12-201ENST00000637370 931 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC100757.1-201ENST00000616872 1835 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 BCORP1-203ENST00000513194 5093 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC104964.3-201ENST00000606115 2860 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 RIOK3P1-201ENST00000418778 1528 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 Y_RNA.22-201ENST00000362492 102 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 RNU6-179P-201ENST00000363350 107 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 SNORA51.2-201ENST00000364595 132 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 GJA6P-201ENST00000415117 1042 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 EI24P4-201ENST00000423683 1078 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 RPL12P18-201ENST00000437175 325 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 LINC02210-201ENST00000444561 288 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 BX842559.2-201ENST00000451418 605 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC007967.1-201ENST00000455422 1159 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC006967.1-201ENST00000467608 589 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 RPS15AP36-201ENST00000492022 382 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC105029.1-201ENST00000520250 669 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC006272.2-201ENST00000594725 163 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AL670379.6-201ENST00000603753 252 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AL670379.11-201ENST00000604059 253 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC008162.1-201ENST00000604718 254 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AL670379.1-201ENST00000604752 252 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AL670379.5-201ENST00000605253 252 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AL670379.12-201ENST00000605291 253 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AL670379.8-201ENST00000605353 252 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AL670379.7-201ENST00000605823 252 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 RNA5SP108-201ENST00000605921 117 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AL121992.2-201ENST00000606262 256 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 AC008121.3-201ENST00000618726 433 ntBASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPAS4Q8IUM7 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AC108467.2-201ENST00000617640 1597 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 SNORA75.4-201ENST00000391278 119 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AL122016.1-201ENST00000403365 367 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 MIR1182-201ENST00000408363 97 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 RNU6-712P-201ENST00000410558 100 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 COX6B1P1-201ENST00000415962 213 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 SAR1AP4-201ENST00000429225 591 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 CACYBPP2-201ENST00000453625 678 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AL121877.1-201ENST00000453704 622 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 RN7SKP260-201ENST00000516907 149 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 RNA5SP503-201ENST00000517047 117 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 HMGB3P26-201ENST00000560051 582 ntBASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.69□□□□□ -1.5
NPAS4Q8IUM7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms