Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AURKAPS2-201ENST00000454983 333 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 RNU6-420P-201ENST00000458780 107 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 RNU6-261P-201ENST00000459506 102 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AL591473.1-201ENST00000464297 313 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 RN7SL385P-201ENST00000468873 276 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 HMGN1P12-201ENST00000499125 195 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 MTCO1P35-201ENST00000515270 228 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 CENPUP1-201ENST00000526649 1202 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AL109766.1-201ENST00000555080 552 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 BNIP3P10-201ENST00000605360 577 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AC015914.2-201ENST00000618167 288 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AC022106.2-201ENST00000620114 757 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AL136221.1-201ENST00000621449 509 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AL451142.2-201ENST00000429076 2090 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
RUFY4Q6ZNE9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RUFY4Q6ZNE9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RUFY4Q6ZNE9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
RUFY4Q6ZNE9 AC011460.1-201ENST00000636268 1834 ntBASIC5.46□□□□□ -1.53
RUFY4Q6ZNE9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.46□□□□□ -1.53
RUFY4Q6ZNE9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.46□□□□□ -1.53
RUFY4Q6ZNE9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 OR5J1P-201ENST00000313544 939 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AC126755.2-208ENST00000327792 462 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AC138969.1-213ENST00000331436 462 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 Y_RNA.263-201ENST00000364659 114 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 UBBP2-201ENST00000376781 231 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 GLULP6-201ENST00000399502 913 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 U3.32-201ENST00000408116 212 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 MRPL50P2-201ENST00000416821 482 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 RPL36AP36-201ENST00000418616 301 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 RWDD4P2-201ENST00000426392 563 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 EZH2P1-201ENST00000431167 291 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AL353597.2-202ENST00000434901 373 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 RPL35AP21-201ENST00000437667 333 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AL450023.3-201ENST00000440592 271 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AC114495.1-201ENST00000441274 436 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AL031584.1-201ENST00000447169 754 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 TPT1P14-201ENST00000448018 505 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 OR1H1P-201ENST00000448731 937 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 RN7SL354P-201ENST00000469282 294 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AC114786.4-201ENST00000508771 728 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AC110792.2-201ENST00000510278 224 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AC105031.1-201ENST00000518550 476 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AC107934.1-201ENST00000522215 217 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AP000907.2-201ENST00000530827 353 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AP003117.2-201ENST00000606010 545 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AC010928.1-201ENST00000592477 1447 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 AC009902.3-201ENST00000606235 2172 ntBASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.46□□□□□ -1.54
RUFY4Q6ZNE9 NMD3P1-201ENST00000439704 1488 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 SAGE2P-201ENST00000420011 2126 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 274.7 ms