Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RPS20P32-201ENST00000456044 356 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 RPS15AP17-201ENST00000470598 390 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 TRBV1-201ENST00000476502 284 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 COX6CP8-201ENST00000522620 226 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC068993.1-201ENST00000546724 589 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 PRR13P7-201ENST00000605538 430 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC130324.3-201ENST00000614165 542 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 uc_338.11-201ENST00000619132 160 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC138627.2-201ENST00000624202 601 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC006484.1-201ENST00000435086 1884 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF43Q68DV7 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF43Q68DV7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF43Q68DV7 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF43Q68DV7 RNF6P1-201ENST00000444889 1784 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF43Q68DV7 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF43Q68DV7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC092125.1-201ENST00000562568 1995 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF43Q68DV7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RNF43Q68DV7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RNF43Q68DV7 OR55B1P-203ENST00000641518 2602 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RNF43Q68DV7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF43Q68DV7 AL157777.2-201ENST00000258070 137 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 RPL32P3-201ENST00000359025 275 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF43Q68DV7 Y_RNA.530-201ENST00000384587 101 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 RNU6-1151P-201ENST00000384684 107 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 DHFRP6-201ENST00000401776 268 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 TPMTP2-201ENST00000414372 726 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 RPS15AP12-201ENST00000419498 388 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 AC093162.1-201ENST00000419682 124 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RNF43Q68DV7 AC018865.2-201ENST00000423631 129 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 PRPS1P1-201ENST00000445305 876 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 TPT1P13-201ENST00000449760 499 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 AC104308.1-201ENST00000454621 333 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 RNU7-66P-201ENST00000459469 62 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 AC083982.1-201ENST00000485679 344 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 AC068781.1-201ENST00000488231 618 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 AC110794.1-201ENST00000505816 425 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 AC021146.1-201ENST00000511202 716 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 RPL39P5-202ENST00000512505 151 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 AL671862.1-201ENST00000515851 349 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 RNA5SP373-201ENST00000517271 95 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 MYL12AP1-201ENST00000518490 515 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 AC027369.5-201ENST00000533838 755 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 RN7SL356P-201ENST00000582228 248 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 MIR4697-201ENST00000582977 78 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 MAGOH2P-202ENST00000584384 429 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 UBE2L4-201ENST00000587688 464 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 AC006116.3-201ENST00000592968 361 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 RNU6-84P-201ENST00000607737 102 ntBASIC5.56□□□□□ -1.52
RNF43Q68DV7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RNF43Q68DV7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RNF43Q68DV7 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF43Q68DV7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF43Q68DV7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF43Q68DV7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF43Q68DV7 TRIM51GP-201ENST00000534741 1350 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF43Q68DV7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 AC104623.2-202ENST00000623477 4002 ntBASIC5.55□□□□□ -1.52
RNF43Q68DV7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF43Q68DV7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms