Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AP000942.1-201ENST00000463969 747 ntBASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 YWHAEP4-201ENST00000505390 198 ntBASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 SNORD46.2-201ENST00000516021 102 ntBASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 AP003396.4-201ENST00000527574 265 ntBASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 HMGB1P42-201ENST00000532126 553 ntBASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 AC063949.1-201ENST00000552900 865 ntBASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 VN1R84P-201ENST00000593697 235 ntBASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 AC104465.1-201ENST00000611365 139 ntBASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 MIR1244-1-201ENST00000612829 85 ntBASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 MIR1244-3-201ENST00000635744 85 ntBASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 MIR1244-2-201ENST00000636449 85 ntBASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 MIR1244-4-202ENST00000636813 85 ntBASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 AC024587.1-201ENST00000505925 2157 ntBASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.57□□□□□ -1.52
RNFT1Q5M7Z0 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AC022034.1-201ENST00000512867 2156 ntBASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 RNA5SP514-201ENST00000363717 111 ntBASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AL096829.1-201ENST00000413677 457 ntBASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 CYP4F30P-202ENST00000420048 405 ntBASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AL391987.1-201ENST00000441025 200 ntBASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 DAP3P1-201ENST00000441522 278 ntBASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AC005077.1-201ENST00000449226 375 ntBASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AC239809.1-201ENST00000450470 217 ntBASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AL139099.1-201ENST00000497398 403 ntBASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 MIR4300-201ENST00000581016 96 ntBASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AC023813.4-201ENST00000607580 580 ntBASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AL049794.2-201ENST00000616301 365 ntBASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 AC016583.1-201ENST00000624221 2431 ntBASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNFT1Q5M7Z0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 GTF2IP4-201ENST00000453092 2054 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 BX322639.1-202ENST00000423987 2213 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 EXOC5P1-201ENST00000510543 1969 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 LINC02555-201ENST00000563933 1951 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms