Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC107294.3-201ENST00000609211 526 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AC096586.1-201ENST00000610267 561 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AC020923.1-201ENST00000624021 917 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AC017104.5-201ENST00000637647 639 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AL035425.3-201ENST00000564206 4996 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 MTND5P28-201ENST00000438005 1594 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AC073346.2-201ENST00000624724 2058 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 SNORA71.1-201ENST00000364523 117 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 SNORA48.8-201ENST00000391324 134 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 ATP5F1P6-201ENST00000402768 767 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 MIR1250-201ENST00000408098 113 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 SNORA11C-201ENST00000408532 129 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 USP9YP19-201ENST00000412165 485 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 AL590762.3-201ENST00000436372 640 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 TRIM60P18-201ENST00000441518 828 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 RPL21P104-201ENST00000464143 478 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 MTCO3P35-201ENST00000485582 781 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 PRELID3BP6-201ENST00000503839 571 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 MTND3P24-201ENST00000506306 329 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 RN7SKP43-201ENST00000516173 320 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 AC009812.2-201ENST00000517657 457 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 AF279873.1-201ENST00000523393 313 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 AL121603.1-201ENST00000553815 142 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 EIF5A2P1-201ENST00000564027 460 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 MIR4474-201ENST00000579189 78 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 AL109653.1-201ENST00000603091 248 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 AL590282.1-201ENST00000610379 1136 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 AC091948.2-201ENST00000636510 279 ntBASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PTPN20Q4JDL3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 SNORA51.12-201ENST00000384448 134 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 RPL31P1-201ENST00000398116 372 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 AL445183.3-201ENST00000414168 502 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 UBE2V1P5-201ENST00000440070 405 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 RPS26P30-201ENST00000443431 335 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 AC233982.1-201ENST00000451247 436 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 RPS24P6-201ENST00000452670 400 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 RPL21P41-201ENST00000459863 264 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 RPS17P11-201ENST00000474297 293 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 AC068724.1-201ENST00000487100 792 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 OR2A20P-203ENST00000498397 1268 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 RN7SKP272-201ENST00000516988 232 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 IGHV3-76-201ENST00000522465 295 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 AL163153.1-201ENST00000554223 283 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 VN1R9P-201ENST00000614184 867 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 ATP5A1P2-202ENST00000616464 443 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 AL356118.1-201ENST00000635272 1078 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.13□□□□□ -1.91
PTPN20Q4JDL3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AC073055.1-201ENST00000456901 1621 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 MIR422A-201ENST00000362286 90 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 RNU6-263P-201ENST00000363811 107 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 RNA5SP387-201ENST00000364226 106 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 DEFB109C-201ENST00000382575 264 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 DEFB109B-201ENST00000382656 264 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 U3.42-201ENST00000408746 214 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms