Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CBX1P83916 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.34□□□□□ -1.87
CBX1P83916 RPS20P24-201ENST00000457473 361 ntBASIC3.34□□□□□ -1.87
CBX1P83916 snoU13.4-201ENST00000458916 104 ntBASIC3.34□□□□□ -1.87
CBX1P83916 AC084024.2-201ENST00000503480 791 ntBASIC3.34□□□□□ -1.87
CBX1P83916 AC093767.1-201ENST00000504523 156 ntBASIC3.34□□□□□ -1.87
CBX1P83916 AC098799.2-201ENST00000509466 868 ntBASIC3.34□□□□□ -1.87
CBX1P83916 AC108064.1-201ENST00000513791 460 ntBASIC3.34□□□□□ -1.87
CBX1P83916 RNA5SP468-201ENST00000516782 93 ntBASIC3.34□□□□□ -1.87
CBX1P83916 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.34□□□□□ -1.87
CBX1P83916 OR5G4P-201ENST00000525251 760 ntBASIC3.34□□□□□ -1.87
CBX1P83916 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.34□□□□□ -1.87
CBX1P83916 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.34□□□□□ -1.87
CBX1P83916 CYB5AP5-201ENST00000549779 389 ntBASIC3.34□□□□□ -1.87
CBX1P83916 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.34□□□□□ -1.87
CBX1P83916 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.34□□□□□ -1.87
CBX1P83916 MTND4LP25-201ENST00000570218 163 ntBASIC3.34□□□□□ -1.87
CBX1P83916 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CBX1P83916 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.34□□□□□ -1.87
CBX1P83916 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.34□□□□□ -1.87
CBX1P83916 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CBX1P83916 AL158211.2-201ENST00000607282 395 ntBASIC3.34□□□□□ -1.87
CBX1P83916 AP000238.1-201ENST00000608759 426 ntBASIC3.34□□□□□ -1.87
CBX1P83916 MIR378J-201ENST00000611988 109 ntBASIC3.34□□□□□ -1.87
CBX1P83916 uc_338.1-201ENST00000612113 180 ntBASIC3.34□□□□□ -1.87
CBX1P83916 AC008759.3-201ENST00000613300 508 ntBASIC3.34□□□□□ -1.87
CBX1P83916 MIR6500-201ENST00000622700 86 ntBASIC3.34□□□□□ -1.87
CBX1P83916 AC139713.2-210ENST00000641741 992 ntBASIC3.34□□□□□ -1.87
CBX1P83916 AC092435.3-201ENST00000565538 3654 ntBASIC3.34□□□□□ -1.88
CBX1P83916 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
CBX1P83916 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CBX1P83916 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CBX1P83916 AC244517.1-201ENST00000606030 2086 ntBASIC3.33□□□□□ -1.88
CBX1P83916 RNA5SP197-201ENST00000363357 119 ntBASIC3.33□□□□□ -1.88
CBX1P83916 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.33□□□□□ -1.88
CBX1P83916 AL022722.2-201ENST00000402519 180 ntBASIC3.33□□□□□ -1.88
CBX1P83916 RSL24D1P1-201ENST00000404972 493 ntBASIC3.33□□□□□ -1.88
CBX1P83916 RPL21P65-201ENST00000406094 466 ntBASIC3.33□□□□□ -1.88
CBX1P83916 AL133264.1-201ENST00000407157 562 ntBASIC3.33□□□□□ -1.88
CBX1P83916 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CBX1P83916 AC019070.1-201ENST00000415008 1024 ntBASIC3.33□□□□□ -1.88
CBX1P83916 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.33□□□□□ -1.88
CBX1P83916 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.33□□□□□ -1.88
CBX1P83916 AC241584.1-201ENST00000438469 1241 ntBASIC3.33□□□□□ -1.88
CBX1P83916 TRIM60P18-201ENST00000441518 828 ntBASIC3.33□□□□□ -1.88
CBX1P83916 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.33□□□□□ -1.88
CBX1P83916 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CBX1P83916 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.33□□□□□ -1.88
CBX1P83916 AP003355.1-201ENST00000518956 587 ntBASIC3.33□□□□□ -1.88
CBX1P83916 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.33□□□□□ -1.88
CBX1P83916 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.33□□□□□ -1.88
CBX1P83916 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.33□□□□□ -1.88
CBX1P83916 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.33□□□□□ -1.88
CBX1P83916 MIR4666A-201ENST00000580160 79 ntBASIC3.33□□□□□ -1.88
CBX1P83916 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.33□□□□□ -1.88
CBX1P83916 AC120053.1-201ENST00000607706 736 ntBASIC3.33□□□□□ -1.88
CBX1P83916 AC005962.2-201ENST00000611427 652 ntBASIC3.33□□□□□ -1.88
CBX1P83916 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.33□□□□□ -1.88
CBX1P83916 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.33□□□□□ -1.88
CBX1P83916 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.33□□□□□ -1.88
CBX1P83916 AC040168.1-201ENST00000623594 991 ntBASIC3.33□□□□□ -1.88
CBX1P83916 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.33□□□□□ -1.88
CBX1P83916 MFSD8-233ENST00000641482 4860 ntBASIC3.33□□□□□ -1.88
CBX1P83916 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CBX1P83916 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CBX1P83916 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CBX1P83916 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CBX1P83916 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CBX1P83916 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CBX1P83916 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CBX1P83916 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CBX1P83916 RN7SKP227-201ENST00000364445 330 ntBASIC3.32□□□□□ -1.88
CBX1P83916 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CBX1P83916 AL024474.1-201ENST00000404655 591 ntBASIC3.32□□□□□ -1.88
CBX1P83916 AL136133.1-201ENST00000413694 376 ntBASIC3.32□□□□□ -1.88
CBX1P83916 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CBX1P83916 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.32□□□□□ -1.88
CBX1P83916 AC012065.2-201ENST00000421295 375 ntBASIC3.32□□□□□ -1.88
CBX1P83916 MTCYBP32-201ENST00000427945 1084 ntBASIC3.32□□□□□ -1.88
CBX1P83916 RPS29P6-201ENST00000438196 145 ntBASIC3.32□□□□□ -1.88
CBX1P83916 RPS12P18-201ENST00000442381 270 ntBASIC3.32□□□□□ -1.88
CBX1P83916 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.32□□□□□ -1.88
CBX1P83916 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.32□□□□□ -1.88
CBX1P83916 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.32□□□□□ -1.88
CBX1P83916 AC008571.1-201ENST00000467232 300 ntBASIC3.32□□□□□ -1.88
CBX1P83916 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CBX1P83916 RN7SL385P-201ENST00000468873 276 ntBASIC3.32□□□□□ -1.88
CBX1P83916 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.32□□□□□ -1.88
CBX1P83916 FCF1P8-201ENST00000510322 597 ntBASIC3.32□□□□□ -1.88
CBX1P83916 RN7SKP13-201ENST00000515933 244 ntBASIC3.32□□□□□ -1.88
CBX1P83916 RNU6-352P-201ENST00000516908 107 ntBASIC3.32□□□□□ -1.88
CBX1P83916 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.32□□□□□ -1.88
CBX1P83916 AC019227.1-201ENST00000526902 510 ntBASIC3.32□□□□□ -1.88
CBX1P83916 ELOCP31-201ENST00000540463 467 ntBASIC3.32□□□□□ -1.88
CBX1P83916 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.32□□□□□ -1.88
CBX1P83916 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.32□□□□□ -1.88
CBX1P83916 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.32□□□□□ -1.88
CBX1P83916 SULT1C2P1-202ENST00000562418 459 ntBASIC3.32□□□□□ -1.88
CBX1P83916 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.32□□□□□ -1.88
CBX1P83916 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms