Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RNU1-61P-201ENST00000516107 151 ntBASIC3.73□□□□□ -1.81
GPC3P51654 RN7SKP57-201ENST00000517248 293 ntBASIC3.73□□□□□ -1.81
GPC3P51654 TGIF1P1-201ENST00000558095 802 ntBASIC3.73□□□□□ -1.81
GPC3P51654 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.73□□□□□ -1.81
GPC3P51654 AP001029.3-201ENST00000588063 596 ntBASIC3.73□□□□□ -1.81
GPC3P51654 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.73□□□□□ -1.81
GPC3P51654 AL450489.1-201ENST00000612071 468 ntBASIC3.73□□□□□ -1.81
GPC3P51654 VN1R74P-201ENST00000613259 503 ntBASIC3.73□□□□□ -1.81
GPC3P51654 AC110801.1-201ENST00000623590 212 ntBASIC3.73□□□□□ -1.81
GPC3P51654 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.73□□□□□ -1.81
GPC3P51654 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.73□□□□□ -1.81
GPC3P51654 Z83843.1-201ENST00000604070 3685 ntBASIC3.73□□□□□ -1.81
GPC3P51654 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
GPC3P51654 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
GPC3P51654 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.72□□□□□ -1.81
GPC3P51654 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GPC3P51654 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
GPC3P51654 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GPC3P51654 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
GPC3P51654 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
GPC3P51654 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
GPC3P51654 U3.19-201ENST00000390893 196 ntBASIC3.72□□□□□ -1.81
GPC3P51654 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
GPC3P51654 HMGN2P20-201ENST00000437531 273 ntBASIC3.72□□□□□ -1.81
GPC3P51654 AL158053.1-201ENST00000441503 453 ntBASIC3.72□□□□□ -1.81
GPC3P51654 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GPC3P51654 AC115115.1-201ENST00000449927 248 ntBASIC3.72□□□□□ -1.81
GPC3P51654 MTCO3P2-201ENST00000457365 171 ntBASIC3.72□□□□□ -1.81
GPC3P51654 AC004801.2-202ENST00000463559 283 ntBASIC3.72□□□□□ -1.81
GPC3P51654 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GPC3P51654 AC021205.2-201ENST00000480069 347 ntBASIC3.72□□□□□ -1.81
GPC3P51654 DSTNP2-201ENST00000504533 515 ntBASIC3.72□□□□□ -1.81
GPC3P51654 AC109471.1-201ENST00000511631 612 ntBASIC3.72□□□□□ -1.81
GPC3P51654 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GPC3P51654 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.72□□□□□ -1.81
GPC3P51654 AL139174.1-201ENST00000531489 886 ntBASIC3.72□□□□□ -1.81
GPC3P51654 AC005476.1-201ENST00000554427 397 ntBASIC3.72□□□□□ -1.81
GPC3P51654 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.72□□□□□ -1.81
GPC3P51654 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.72□□□□□ -1.81
GPC3P51654 MIR4425-201ENST00000580572 84 ntBASIC3.72□□□□□ -1.81
GPC3P51654 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.72□□□□□ -1.81
GPC3P51654 VIS1.1-201ENST00000610517 203 ntBASIC3.72□□□□□ -1.81
GPC3P51654 AC018926.1-201ENST00000616335 435 ntBASIC3.72□□□□□ -1.81
GPC3P51654 AC093875.1-201ENST00000623688 504 ntBASIC3.72□□□□□ -1.81
GPC3P51654 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.72□□□□□ -1.81
GPC3P51654 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GPC3P51654 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.72□□□□□ -1.81
GPC3P51654 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.72□□□□□ -1.81
GPC3P51654 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
GPC3P51654 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.72□□□□□ -1.81
GPC3P51654 AL136164.4-201ENST00000625013 2135 ntBASIC3.71□□□□□ -1.81
GPC3P51654 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.81
GPC3P51654 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.71□□□□□ -1.82
GPC3P51654 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
GPC3P51654 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
GPC3P51654 RNU6-989P-201ENST00000362756 107 ntBASIC3.71□□□□□ -1.82
GPC3P51654 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
GPC3P51654 OR1L1-202ENST00000373686 1083 ntBASIC3.71□□□□□ -1.82
GPC3P51654 AL139098.1-201ENST00000407291 389 ntBASIC3.71□□□□□ -1.82
GPC3P51654 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.71□□□□□ -1.82
GPC3P51654 RNU4-65P-201ENST00000410473 140 ntBASIC3.71□□□□□ -1.82
GPC3P51654 Z99755.1-201ENST00000414048 380 ntBASIC3.71□□□□□ -1.82
GPC3P51654 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.71□□□□□ -1.82
GPC3P51654 TAF13P2-201ENST00000416876 286 ntBASIC3.71□□□□□ -1.82
GPC3P51654 FNDC3CP-201ENST00000420795 1155 ntBASIC3.71□□□□□ -1.82
GPC3P51654 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.71□□□□□ -1.82
GPC3P51654 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.71□□□□□ -1.82
GPC3P51654 UBE2V1P6-201ENST00000430840 422 ntBASIC3.71□□□□□ -1.82
GPC3P51654 AL512637.2-201ENST00000431287 1256 ntBASIC3.71□□□□□ -1.82
GPC3P51654 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.71□□□□□ -1.82
GPC3P51654 AC091862.1-201ENST00000438016 1100 ntBASIC3.71□□□□□ -1.82
GPC3P51654 TXNP1-201ENST00000441872 371 ntBASIC3.71□□□□□ -1.82
GPC3P51654 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.71□□□□□ -1.82
GPC3P51654 Z75741.1-201ENST00000446793 314 ntBASIC3.71□□□□□ -1.82
GPC3P51654 MRPS31P2-201ENST00000451581 518 ntBASIC3.71□□□□□ -1.82
GPC3P51654 RPL12P26-201ENST00000452430 487 ntBASIC3.71□□□□□ -1.82
GPC3P51654 RNU7-140P-201ENST00000459546 60 ntBASIC3.71□□□□□ -1.82
GPC3P51654 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.71□□□□□ -1.82
GPC3P51654 AC021678.1-201ENST00000505195 936 ntBASIC3.71□□□□□ -1.82
GPC3P51654 AC112198.1-201ENST00000505369 1220 ntBASIC3.71□□□□□ -1.82
GPC3P51654 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GPC3P51654 ARL2BPP6-201ENST00000512757 439 ntBASIC3.71□□□□□ -1.82
GPC3P51654 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.71□□□□□ -1.82
GPC3P51654 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.71□□□□□ -1.82
GPC3P51654 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.71□□□□□ -1.82
GPC3P51654 CKS1BP3-201ENST00000600888 237 ntBASIC3.71□□□□□ -1.82
GPC3P51654 AL606834.2-201ENST00000602954 668 ntBASIC3.71□□□□□ -1.82
GPC3P51654 AC092574.1-201ENST00000609771 420 ntBASIC3.71□□□□□ -1.82
GPC3P51654 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.71□□□□□ -1.82
GPC3P51654 AL121594.5-201ENST00000631724 573 ntBASIC3.71□□□□□ -1.82
GPC3P51654 AL513302.2-201ENST00000562313 1842 ntBASIC3.71□□□□□ -1.82
GPC3P51654 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
GPC3P51654 ZNF542P-204ENST00000482727 1305 ntBASIC3.7□□□□□ -1.82
GPC3P51654 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GPC3P51654 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
GPC3P51654 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GPC3P51654 SNORA38.1-201ENST00000364172 131 ntBASIC3.7□□□□□ -1.82
GPC3P51654 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GPC3P51654 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GPC3P51654 HMGN1P24-201ENST00000412282 298 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms