Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC087879.1-201ENST00000474343 374 ntBASIC5.79□□□□□ -1.48
HOXD8P13378 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXD8P13378 CEACAMP10-202ENST00000495431 496 ntBASIC5.79□□□□□ -1.48
HOXD8P13378 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXD8P13378 RN7SKP260-201ENST00000516907 149 ntBASIC5.79□□□□□ -1.48
HOXD8P13378 RNU6-1271P-201ENST00000517049 105 ntBASIC5.79□□□□□ -1.48
HOXD8P13378 HMGB1P19-201ENST00000517578 577 ntBASIC5.79□□□□□ -1.48
HOXD8P13378 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.79□□□□□ -1.48
HOXD8P13378 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXD8P13378 DEFB109D-201ENST00000529497 240 ntBASIC5.79□□□□□ -1.48
HOXD8P13378 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXD8P13378 GSTP1P1-201ENST00000548078 319 ntBASIC5.79□□□□□ -1.48
HOXD8P13378 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXD8P13378 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HOXD8P13378 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HOXD8P13378 AC010424.2-201ENST00000607594 443 ntBASIC5.79□□□□□ -1.48
HOXD8P13378 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXD8P13378 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.79□□□□□ -1.48
HOXD8P13378 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXD8P13378 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXD8P13378 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXD8P13378 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXD8P13378 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.79□□□□□ -1.48
HOXD8P13378 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HOXD8P13378 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXD8P13378 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXD8P13378 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXD8P13378 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXD8P13378 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXD8P13378 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXD8P13378 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXD8P13378 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXD8P13378 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXD8P13378 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXD8P13378 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
HOXD8P13378 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXD8P13378 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD8P13378 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXD8P13378 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXD8P13378 AL591135.1-201ENST00000401578 5914 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD8P13378 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD8P13378 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD8P13378 AL359955.1-201ENST00000455242 3275 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HOXD8P13378 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXD8P13378 RN7SKP185-201ENST00000362813 326 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 Y_RNA.476-201ENST00000384347 108 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 RNU6-985P-201ENST00000410182 104 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 OR2AM1P-201ENST00000422137 422 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 AL360081.1-201ENST00000428299 555 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXD8P13378 RPL23AP43-201ENST00000446445 471 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 AC104058.1-201ENST00000448028 297 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXD8P13378 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXD8P13378 AC083982.1-201ENST00000485679 344 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXD8P13378 Y_RNA.654-201ENST00000497848 106 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD8P13378 AC016559.2-201ENST00000510759 359 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 AL671862.1-201ENST00000515851 349 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD8P13378 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXD8P13378 AL118558.2-201ENST00000556294 238 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXD8P13378 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD8P13378 MIR4703-201ENST00000577728 79 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 MIR4775-201ENST00000581168 75 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXD8P13378 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXD8P13378 AC011487.3-201ENST00000593607 453 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 BNIP3P25-201ENST00000596023 559 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXD8P13378 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXD8P13378 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXD8P13378 AL512782.1-201ENST00000603093 364 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 AC245517.5-201ENST00000611529 162 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 AL390240.1-201ENST00000612950 384 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 EIF3FP1-201ENST00000613970 806 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 RBPJP2-201ENST00000618187 1444 ntBASIC5.78□□□□□ -1.48
HOXD8P13378 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD8P13378 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXD8P13378 AC009902.3-201ENST00000606235 2172 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HOXD8P13378 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD8P13378 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD8P13378 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
HOXD8P13378 AC020656.2-201ENST00000613291 5309 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD8P13378 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD8P13378 Y_RNA.47-201ENST00000362697 108 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 RNU6-179P-201ENST00000363350 107 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 Y_RNA.158-201ENST00000363651 101 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 RNU6-601P-201ENST00000384540 107 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HOXD8P13378 RNU2-22P-201ENST00000411266 212 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 COX6B1P1-201ENST00000415962 213 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 PSMA6P3-201ENST00000428242 164 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms