Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
CHRNA1P02708 RNU6-549P-201ENST00000384433 107 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 U3.26-201ENST00000391236 204 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHRNA1P02708 MTCO2P31-201ENST00000402702 684 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 AC126124.2-201ENST00000413542 321 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 TAF13P2-201ENST00000416876 286 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 RPL23AP69-201ENST00000431134 458 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.57□□□□□ -1.84
CHRNA1P02708 AL096829.2-201ENST00000446582 742 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 AL050341.1-201ENST00000447743 313 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.57□□□□□ -1.84
CHRNA1P02708 VN1R17P-201ENST00000472048 1090 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 AC080014.1-201ENST00000496877 1201 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.57□□□□□ -1.84
CHRNA1P02708 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.57□□□□□ -1.84
CHRNA1P02708 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.57□□□□□ -1.84
CHRNA1P02708 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
CHRNA1P02708 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.57□□□□□ -1.84
CHRNA1P02708 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.57□□□□□ -1.84
CHRNA1P02708 RN7SKP289-201ENST00000517244 295 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CHRNA1P02708 IGHV3-76-201ENST00000522465 295 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHRNA1P02708 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.57□□□□□ -1.84
CHRNA1P02708 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.57□□□□□ -1.84
CHRNA1P02708 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.57□□□□□ -1.84
CHRNA1P02708 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.57□□□□□ -1.84
CHRNA1P02708 AL163153.1-201ENST00000554223 283 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.57□□□□□ -1.84
CHRNA1P02708 MTCO1P40-201ENST00000574371 625 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 LARP7P3-201ENST00000579888 337 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 MIR2682-201ENST00000580305 110 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 AC090616.5-202ENST00000582111 297 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.57□□□□□ -1.84
CHRNA1P02708 AC022146.1-201ENST00000595307 847 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 AL136520.1-201ENST00000600311 1322 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 AC133794.1-201ENST00000602731 914 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 HSPE1P14-201ENST00000605812 302 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 AL355578.1-201ENST00000607405 1328 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 RMST_8.1-201ENST00000610287 165 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHRNA1P02708 AC008759.3-201ENST00000613300 508 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.57□□□□□ -1.84
CHRNA1P02708 AP000943.4-201ENST00000622912 357 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 AC006386.2-201ENST00000624491 75 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 AC012005.1-201ENST00000624575 75 ntBASIC3.57□□□□□ -1.84
CHRNA1P02708 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHRNA1P02708 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHRNA1P02708 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CHRNA1P02708 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CHRNA1P02708 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHRNA1P02708 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.56□□□□□ -1.84
CHRNA1P02708 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CHRNA1P02708 AL355615.1-201ENST00000406187 641 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 RN7SKP285-201ENST00000410137 318 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.56□□□□□ -1.84
CHRNA1P02708 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.56□□□□□ -1.84
CHRNA1P02708 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CHRNA1P02708 AL590103.1-201ENST00000434488 307 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.56□□□□□ -1.84
CHRNA1P02708 SEPT14P24-201ENST00000447236 180 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 RPS4XP2-201ENST00000458402 793 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CHRNA1P02708 AC104629.1-201ENST00000494226 508 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.56□□□□□ -1.84
CHRNA1P02708 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.56□□□□□ -1.84
CHRNA1P02708 AC010198.2-201ENST00000550612 259 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.56□□□□□ -1.84
CHRNA1P02708 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.56□□□□□ -1.84
CHRNA1P02708 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.56□□□□□ -1.84
CHRNA1P02708 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.56□□□□□ -1.84
CHRNA1P02708 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.56□□□□□ -1.84
CHRNA1P02708 MIR4738-201ENST00000579134 87 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.56□□□□□ -1.84
CHRNA1P02708 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.56□□□□□ -1.84
CHRNA1P02708 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.56□□□□□ -1.84
CHRNA1P02708 AC002487.1-201ENST00000604565 994 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 IGHV3-29-201ENST00000604817 344 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 AC016877.3-201ENST00000606778 504 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 AC013468.1-201ENST00000608680 598 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 VN1R74P-201ENST00000613259 503 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 AL157817.1-201ENST00000614264 790 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.56□□□□□ -1.84
CHRNA1P02708 AC253576.2-201ENST00000618815 580 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 MIR6852-201ENST00000621699 66 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 AP002371.2-201ENST00000624450 503 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.56□□□□□ -1.84
CHRNA1P02708 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CHRNA1P02708 ZNF826P-207ENST00000622273 1910 ntBASIC3.56□□□□□ -1.84
CHRNA1P02708 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHRNA1P02708 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHRNA1P02708 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CHRNA1P02708 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.55□□□□□ -1.84
CHRNA1P02708 AC058791.1-201ENST00000608412 3198 ntBASIC3.55□□□□□ -1.84
CHRNA1P02708 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CHRNA1P02708 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHRNA1P02708 SNORA80A-201ENST00000363922 136 ntBASIC3.55□□□□□ -1.84
CHRNA1P02708 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms