Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RN7SKP283-201ENST00000517197 270 ntBASIC2.51□□□□□ -2.01
TNFP01375 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.51□□□□□ -2.01
TNFP01375 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TNFP01375 OR4A45P-201ENST00000529954 901 ntBASIC2.51□□□□□ -2.01
TNFP01375 PTP4A1P6-201ENST00000531034 478 ntBASIC2.51□□□□□ -2.01
TNFP01375 AC106734.1-201ENST00000568646 663 ntBASIC2.51□□□□□ -2.01
TNFP01375 YWHAQP7-201ENST00000603536 658 ntBASIC2.51□□□□□ -2.01
TNFP01375 AC007621.1-201ENST00000604544 437 ntBASIC2.51□□□□□ -2.01
TNFP01375 AC112503.1-201ENST00000608436 391 ntBASIC2.51□□□□□ -2.01
TNFP01375 AC069234.5-201ENST00000611056 416 ntBASIC2.51□□□□□ -2.01
TNFP01375 CTSLP2-204ENST00000629029 392 ntBASIC2.51□□□□□ -2.01
TNFP01375 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.51□□□□□ -2.01
TNFP01375 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.51□□□□□ -2.01
TNFP01375 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TNFP01375 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TNFP01375 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.51□□□□□ -2.01
TNFP01375 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
TNFP01375 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.51□□□□□ -2.01
TNFP01375 MTND4P34-201ENST00000572715 1371 ntBASIC2.5□□□□□ -2.01
TNFP01375 RNU1-100P-201ENST00000365255 165 ntBASIC2.5□□□□□ -2.01
TNFP01375 AL356806.1-201ENST00000422524 916 ntBASIC2.5□□□□□ -2.01
TNFP01375 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.5□□□□□ -2.01
TNFP01375 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.5□□□□□ -2.01
TNFP01375 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.5□□□□□ -2.01
TNFP01375 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.5□□□□□ -2.01
TNFP01375 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TNFP01375 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.5□□□□□ -2.01
TNFP01375 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.5□□□□□ -2.01
TNFP01375 RPL7P36-201ENST00000444633 681 ntBASIC2.5□□□□□ -2.01
TNFP01375 COX6CP2-201ENST00000444980 225 ntBASIC2.5□□□□□ -2.01
TNFP01375 SSXP4-201ENST00000451349 245 ntBASIC2.5□□□□□ -2.01
TNFP01375 OR6K1P-201ENST00000456766 971 ntBASIC2.5□□□□□ -2.01
TNFP01375 HMGN2P16-201ENST00000456802 261 ntBASIC2.5□□□□□ -2.01
TNFP01375 RPL23AP11-201ENST00000475260 469 ntBASIC2.5□□□□□ -2.01
TNFP01375 SRIP1-201ENST00000489235 288 ntBASIC2.5□□□□□ -2.01
TNFP01375 RNA5SP320-201ENST00000516263 124 ntBASIC2.5□□□□□ -2.01
TNFP01375 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.5□□□□□ -2.01
TNFP01375 AC027176.1-201ENST00000560204 514 ntBASIC2.5□□□□□ -2.01
TNFP01375 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.5□□□□□ -2.01
TNFP01375 NF1P5-201ENST00000588287 448 ntBASIC2.5□□□□□ -2.01
TNFP01375 AC078899.3-201ENST00000599065 212 ntBASIC2.5□□□□□ -2.01
TNFP01375 AC012119.1-201ENST00000603184 222 ntBASIC2.5□□□□□ -2.01
TNFP01375 AC131902.3-201ENST00000611767 581 ntBASIC2.5□□□□□ -2.01
TNFP01375 AC025034.2-201ENST00000623264 286 ntBASIC2.5□□□□□ -2.01
TNFP01375 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.5□□□□□ -2.01
TNFP01375 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
TNFP01375 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
TNFP01375 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
TNFP01375 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TNFP01375 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TNFP01375 RNVU1-3-201ENST00000364313 161 ntBASIC2.49□□□□□ -2.01
TNFP01375 U8.9-201ENST00000365667 134 ntBASIC2.49□□□□□ -2.01
TNFP01375 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.49□□□□□ -2.01
TNFP01375 MIR607-201ENST00000385241 96 ntBASIC2.49□□□□□ -2.01
TNFP01375 ATF1P1-201ENST00000406040 927 ntBASIC2.49□□□□□ -2.01
TNFP01375 AL390023.1-201ENST00000428836 262 ntBASIC2.49□□□□□ -2.01
TNFP01375 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.49□□□□□ -2.01
TNFP01375 AC093663.2-201ENST00000484625 313 ntBASIC2.49□□□□□ -2.01
TNFP01375 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TNFP01375 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.49□□□□□ -2.01
TNFP01375 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.49□□□□□ -2.01
TNFP01375 AF279873.1-201ENST00000523393 313 ntBASIC2.49□□□□□ -2.01
TNFP01375 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.49□□□□□ -2.01
TNFP01375 AC128657.1-201ENST00000549459 145 ntBASIC2.49□□□□□ -2.01
TNFP01375 AL355836.1-201ENST00000555951 870 ntBASIC2.49□□□□□ -2.01
TNFP01375 AL157394.1-201ENST00000562983 1224 ntBASIC2.49□□□□□ -2.01
TNFP01375 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.49□□□□□ -2.01
TNFP01375 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.49□□□□□ -2.01
TNFP01375 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.49□□□□□ -2.01
TNFP01375 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TNFP01375 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TNFP01375 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TNFP01375 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.48□□□□□ -2.01
TNFP01375 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
TNFP01375 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TNFP01375 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.48□□□□□ -2.01
TNFP01375 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
TNFP01375 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TNFP01375 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TNFP01375 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TNFP01375 RNU6-600P-201ENST00000362524 99 ntBASIC2.48□□□□□ -2.01
TNFP01375 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TNFP01375 SNORA26.7-201ENST00000391288 122 ntBASIC2.48□□□□□ -2.01
TNFP01375 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TNFP01375 RPS20P25-201ENST00000412447 352 ntBASIC2.48□□□□□ -2.01
TNFP01375 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.48□□□□□ -2.01
TNFP01375 AC104332.2-201ENST00000429959 156 ntBASIC2.48□□□□□ -2.01
TNFP01375 MYL8P-204ENST00000431574 518 ntBASIC2.48□□□□□ -2.01
TNFP01375 PTP4A1P3-201ENST00000433661 420 ntBASIC2.48□□□□□ -2.01
TNFP01375 HMGB1P45-201ENST00000435986 653 ntBASIC2.48□□□□□ -2.01
TNFP01375 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.48□□□□□ -2.01
TNFP01375 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.48□□□□□ -2.01
TNFP01375 RPL36AP33-201ENST00000450395 310 ntBASIC2.48□□□□□ -2.01
TNFP01375 OR7L1P-201ENST00000456181 380 ntBASIC2.48□□□□□ -2.01
TNFP01375 HSPE1P6-201ENST00000479457 291 ntBASIC2.48□□□□□ -2.01
TNFP01375 RN7SL499P-201ENST00000481141 276 ntBASIC2.48□□□□□ -2.01
TNFP01375 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.48□□□□□ -2.01
TNFP01375 AC008413.1-201ENST00000511864 177 ntBASIC2.48□□□□□ -2.01
TNFP01375 SEC11B-201ENST00000518383 499 ntBASIC2.48□□□□□ -2.01
TNFP01375 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms