Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC068135.1-201ENST00000446164 246 ntBASIC2.51□□□□□ -2.01
CPSF4O95639 ST13P20-201ENST00000447996 1065 ntBASIC2.51□□□□□ -2.01
CPSF4O95639 AC091179.1-201ENST00000461606 579 ntBASIC2.51□□□□□ -2.01
CPSF4O95639 RPL21P103-201ENST00000479921 488 ntBASIC2.51□□□□□ -2.01
CPSF4O95639 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.51□□□□□ -2.01
CPSF4O95639 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.51□□□□□ -2.01
CPSF4O95639 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.51□□□□□ -2.01
CPSF4O95639 HIGD1AP13-201ENST00000509878 289 ntBASIC2.51□□□□□ -2.01
CPSF4O95639 TBCAP3-201ENST00000512475 312 ntBASIC2.51□□□□□ -2.01
CPSF4O95639 SNORA31.21-201ENST00000517180 77 ntBASIC2.51□□□□□ -2.01
CPSF4O95639 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.51□□□□□ -2.01
CPSF4O95639 AC007536.1-201ENST00000533382 349 ntBASIC2.51□□□□□ -2.01
CPSF4O95639 MIR4325-201ENST00000583049 90 ntBASIC2.51□□□□□ -2.01
CPSF4O95639 MIR5195-201ENST00000583555 115 ntBASIC2.51□□□□□ -2.01
CPSF4O95639 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.51□□□□□ -2.01
CPSF4O95639 AL392112.1-201ENST00000605115 829 ntBASIC2.51□□□□□ -2.01
CPSF4O95639 AC105429.2-201ENST00000610567 517 ntBASIC2.51□□□□□ -2.01
CPSF4O95639 AC107308.1-201ENST00000615897 301 ntBASIC2.51□□□□□ -2.01
CPSF4O95639 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CPSF4O95639 LRRC77P-213ENST00000637727 880 ntBASIC2.51□□□□□ -2.01
CPSF4O95639 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CPSF4O95639 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CPSF4O95639 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
CPSF4O95639 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.51□□□□□ -2.01
CPSF4O95639 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CPSF4O95639 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CPSF4O95639 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.51□□□□□ -2.01
CPSF4O95639 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CPSF4O95639 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CPSF4O95639 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CPSF4O95639 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CPSF4O95639 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
CPSF4O95639 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.5□□□□□ -2.01
CPSF4O95639 HMGB3P31-201ENST00000413333 595 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 USP9YP20-201ENST00000419224 558 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 YPEL5P1-201ENST00000419731 367 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 AL645937.1-202ENST00000421799 937 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.5□□□□□ -2.01
CPSF4O95639 RNFT1P2-201ENST00000443064 757 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.5□□□□□ -2.01
CPSF4O95639 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.5□□□□□ -2.01
CPSF4O95639 RSL24D1P3-201ENST00000449255 495 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.5□□□□□ -2.01
CPSF4O95639 AC104689.1-201ENST00000473356 768 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 SRIP1-201ENST00000489235 288 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.5□□□□□ -2.01
CPSF4O95639 AC133963.2-201ENST00000513686 578 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.5□□□□□ -2.01
CPSF4O95639 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.5□□□□□ -2.01
CPSF4O95639 AP004242.1-201ENST00000533701 349 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.5□□□□□ -2.01
CPSF4O95639 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.5□□□□□ -2.01
CPSF4O95639 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.5□□□□□ -2.01
CPSF4O95639 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.5□□□□□ -2.01
CPSF4O95639 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.5□□□□□ -2.01
CPSF4O95639 AL627309.6-201ENST00000606857 840 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 OR2BH1P-201ENST00000608850 864 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.5□□□□□ -2.01
CPSF4O95639 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.5□□□□□ -2.01
CPSF4O95639 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CPSF4O95639 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CPSF4O95639 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CPSF4O95639 Z82195.2-201ENST00000612348 18351 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 AC118273.1-201ENST00000525324 3006 ntBASIC2.5□□□□□ -2.01
CPSF4O95639 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
CPSF4O95639 AC104446.1-201ENST00000613728 1321 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.49□□□□□ -2.01
CPSF4O95639 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.49□□□□□ -2.01
CPSF4O95639 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.49□□□□□ -2.01
CPSF4O95639 SNORD46.1-201ENST00000364139 104 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.49□□□□□ -2.01
CPSF4O95639 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CPSF4O95639 RNU6-1293P-201ENST00000384077 107 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 SNORA44-201ENST00000384584 132 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CPSF4O95639 ATF1P1-201ENST00000406040 927 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 AL158825.1-201ENST00000414735 521 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.49□□□□□ -2.01
CPSF4O95639 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.49□□□□□ -2.01
CPSF4O95639 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.49□□□□□ -2.01
CPSF4O95639 AC073508.1-201ENST00000428866 656 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.49□□□□□ -2.01
CPSF4O95639 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.49□□□□□ -2.01
CPSF4O95639 AL135938.1-201ENST00000443141 297 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.49□□□□□ -2.01
CPSF4O95639 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.49□□□□□ -2.01
CPSF4O95639 NANOGNBP1-201ENST00000448444 480 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 CACYBPP2-201ENST00000453625 678 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.49□□□□□ -2.01
CPSF4O95639 RPL23AP31-201ENST00000456160 467 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 MTND2P30-201ENST00000456663 382 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.49□□□□□ -2.01
CPSF4O95639 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.49□□□□□ -2.01
CPSF4O95639 AC026427.2-201ENST00000506228 536 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 AC010468.3-201ENST00000508225 458 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 RNU6-1102P-201ENST00000516149 96 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 RNU6-826P-201ENST00000516827 104 ntBASIC2.49□□□□□ -2.01
CPSF4O95639 SNORA76.2-201ENST00000517095 137 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms