Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NKX2-2O95096 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.79□□□□□ -1.8
NKX2-2O95096 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-2O95096 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
NKX2-2O95096 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NKX2-2O95096 ZNF833P-201ENST00000424938 1494 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NKX2-2O95096 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
NKX2-2O95096 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.78□□□□□ -1.8
NKX2-2O95096 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.78□□□□□ -1.8
NKX2-2O95096 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NKX2-2O95096 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NKX2-2O95096 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-2O95096 AC126755.2-208ENST00000327792 462 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NKX2-2O95096 AC138969.1-213ENST00000331436 462 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 RN7SKP44-201ENST00000363602 316 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 SNORD74.4-201ENST00000364129 80 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 RNU6-769P-201ENST00000384407 104 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 SKINT1L-201ENST00000401057 817 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 MIR1302-8-201ENST00000408342 128 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 RPL7P8-201ENST00000411964 730 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 RPL36AP36-201ENST00000418616 301 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 AC099677.1-201ENST00000420575 175 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 RPS27AP14-201ENST00000422868 454 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 AL445669.1-201ENST00000426743 755 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-2O95096 AL365184.2-201ENST00000431139 435 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 MTND1P30-201ENST00000441241 901 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-2O95096 MTND2P4-201ENST00000445034 1004 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-2O95096 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.78□□□□□ -1.8
NKX2-2O95096 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-2O95096 OR6K1P-201ENST00000456766 971 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-2O95096 AP001025.2-201ENST00000490908 477 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 AC034222.1-201ENST00000494052 532 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.78□□□□□ -1.8
NKX2-2O95096 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-2O95096 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NKX2-2O95096 AC108064.1-201ENST00000513791 460 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-2O95096 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-2O95096 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-2O95096 GTF2IP22-201ENST00000554443 182 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.78□□□□□ -1.8
NKX2-2O95096 ROCK1P1-201ENST00000573767 549 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 AC006270.2-201ENST00000578523 652 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 PIGPP4-201ENST00000584447 307 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-2O95096 AC012669.1-201ENST00000603209 283 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 AL590229.1-201ENST00000603497 542 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 ARF4P1-201ENST00000605447 541 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 MLECP1-201ENST00000615893 709 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 AC048344.4-201ENST00000619744 527 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-2O95096 CRYM-AS1-204ENST00000637983 556 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NKX2-2O95096 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NKX2-2O95096 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NKX2-2O95096 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NKX2-2O95096 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NKX2-2O95096 AL157700.1-201ENST00000561973 1432 ntBASIC3.78□□□□□ -1.8
NKX2-2O95096 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.81
NKX2-2O95096 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.78□□□□□ -1.81
NKX2-2O95096 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
NKX2-2O95096 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-2O95096 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-2O95096 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-2O95096 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-2O95096 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 OR11H4-201ENST00000315409 1082 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 MIR448-201ENST00000362131 111 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 Y_RNA.97-201ENST00000363094 102 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 RNU4-40P-201ENST00000364351 143 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-2O95096 RNU6-629P-201ENST00000384061 103 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 RNU11-4P-201ENST00000391149 133 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 SNORA3C-201ENST00000408792 125 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 RNA5SP104-201ENST00000410989 118 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.77□□□□□ -1.81
NKX2-2O95096 AC108032.1-201ENST00000416706 207 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 NPM1P11-201ENST00000417106 855 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.77□□□□□ -1.81
NKX2-2O95096 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.77□□□□□ -1.81
NKX2-2O95096 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.77□□□□□ -1.81
NKX2-2O95096 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.77□□□□□ -1.81
NKX2-2O95096 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.77□□□□□ -1.81
NKX2-2O95096 AC091862.1-201ENST00000438016 1100 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.77□□□□□ -1.81
NKX2-2O95096 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.77□□□□□ -1.81
NKX2-2O95096 KATNBL1P6-201ENST00000453433 915 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.77□□□□□ -1.81
NKX2-2O95096 AP000926.1-201ENST00000479573 241 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.77□□□□□ -1.81
NKX2-2O95096 DSTNP2-201ENST00000504533 515 ntBASIC3.77□□□□□ -1.81
NKX2-2O95096 HMGB1P22-201ENST00000505315 124 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms