Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.13□□□□□ -1.75
SMAD6O43541 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.13□□□□□ -1.75
SMAD6O43541 RNU6-718P-201ENST00000516166 105 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 RNU6-416P-201ENST00000516265 103 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 RNU6-1225P-201ENST00000516336 65 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.13□□□□□ -1.75
SMAD6O43541 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.13□□□□□ -1.75
SMAD6O43541 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.13□□□□□ -1.75
SMAD6O43541 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SMAD6O43541 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.13□□□□□ -1.75
SMAD6O43541 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SMAD6O43541 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.13□□□□□ -1.75
SMAD6O43541 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.13□□□□□ -1.75
SMAD6O43541 GTF2IP22-201ENST00000554443 182 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 AC009063.1-201ENST00000563342 702 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.13□□□□□ -1.75
SMAD6O43541 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.13□□□□□ -1.75
SMAD6O43541 AC015871.2-201ENST00000603605 948 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 MIR432-201ENST00000606207 94 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 AL589743.7-201ENST00000612637 233 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 MIR6875-201ENST00000617506 72 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SMAD6O43541 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
SMAD6O43541 MIR7702-201ENST00000621931 59 ntBASIC4.13□□□□□ -1.75
SMAD6O43541 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SMAD6O43541 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SMAD6O43541 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SMAD6O43541 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SMAD6O43541 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SMAD6O43541 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMAD6O43541 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMAD6O43541 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMAD6O43541 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMAD6O43541 FGF7P2-201ENST00000332473 296 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMAD6O43541 SNORD35B-201ENST00000363660 87 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 RNU6-660P-201ENST00000364566 109 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 RHOT1P2-201ENST00000366423 333 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 RNU6-348P-201ENST00000384386 107 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.12□□□□□ -1.75
SMAD6O43541 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 RPL23AP39-201ENST00000415533 405 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.12□□□□□ -1.75
SMAD6O43541 MTND4P28-201ENST00000426217 387 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 HLA-N-201ENST00000437516 135 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 EEF1E1P1-201ENST00000446998 430 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.12□□□□□ -1.75
SMAD6O43541 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.12□□□□□ -1.75
SMAD6O43541 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.12□□□□□ -1.75
SMAD6O43541 RPS11P1-201ENST00000451072 473 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 DNAJC19P1-201ENST00000455312 319 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.12□□□□□ -1.75
SMAD6O43541 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.12□□□□□ -1.75
SMAD6O43541 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
SMAD6O43541 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.12□□□□□ -1.75
SMAD6O43541 AC093281.2-201ENST00000510153 597 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 RN7SKP244-201ENST00000516513 307 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 IGJP1-201ENST00000522682 475 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.12□□□□□ -1.75
SMAD6O43541 PTP4A1P6-201ENST00000531034 478 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.12□□□□□ -1.75
SMAD6O43541 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.12□□□□□ -1.75
SMAD6O43541 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.12□□□□□ -1.75
SMAD6O43541 AC025627.2-201ENST00000576220 160 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMAD6O43541 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.12□□□□□ -1.75
SMAD6O43541 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 LLPHP1-201ENST00000603571 367 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 AL049634.3-201ENST00000604968 457 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 AL031666.3-201ENST00000609320 1006 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 AC138932.5-201ENST00000617759 563 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 AC072046.2-201ENST00000618366 268 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.12□□□□□ -1.75
SMAD6O43541 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SMAD6O43541 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMAD6O43541 AC068254.2-201ENST00000623938 3577 ntBASIC4.12□□□□□ -1.75
SMAD6O43541 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMAD6O43541 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.11□□□□□ -1.75
SMAD6O43541 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.11□□□□□ -1.75
SMAD6O43541 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.11□□□□□ -1.75
SMAD6O43541 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SMAD6O43541 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.11□□□□□ -1.75
SMAD6O43541 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SMAD6O43541 Z82217.1-201ENST00000625157 8149 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SMAD6O43541 MIR448-201ENST00000362131 111 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 RNU6-1339P-201ENST00000363574 91 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.11□□□□□ -1.75
SMAD6O43541 RNU6-259P-201ENST00000383999 107 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 CYCSP45-201ENST00000402289 315 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 RNU6-77P-201ENST00000410554 91 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 RNA5SP104-201ENST00000410989 118 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AC016831.2-201ENST00000417179 352 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.11□□□□□ -1.75
SMAD6O43541 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AL050321.1-201ENST00000432363 400 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.11□□□□□ -1.75
SMAD6O43541 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.11□□□□□ -1.75
SMAD6O43541 MTND1P28-201ENST00000435623 950 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms