Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNU6-685P-201ENST00000517088 95 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 DEFB108D-201ENST00000527787 222 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AC015982.1-201ENST00000608113 465 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AL138726.1-201ENST00000614873 333 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AC010378.1-201ENST00000619270 362 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AL669831.3-213ENST00000636676 183 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AL731532.2-201ENST00000623542 1953 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AL049641.1-201ENST00000441055 1948 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 XIAPP3-201ENST00000312918 795 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 Y_RNA.5-201ENST00000362334 102 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 RNU1-65P-201ENST00000363919 148 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 OR1L6-202ENST00000373684 1044 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 SNORD56.6-201ENST00000384569 71 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 RNU6-1127P-201ENST00000384580 107 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 MRPL42P3-201ENST00000401492 326 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AL391417.1-201ENST00000404100 426 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 MIR1302-3-201ENST00000408128 138 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 RN7SKP159-201ENST00000410657 292 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 Y_RNA.618-201ENST00000410949 107 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 MCFD2P1-201ENST00000417812 300 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AC099782.1-201ENST00000425889 474 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AL731563.1-201ENST00000442202 214 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AC010655.1-201ENST00000449336 292 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 SETP20-201ENST00000457046 852 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 PPIAP21-201ENST00000464473 501 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AC092865.4-201ENST00000477936 615 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 MTCO3P44-201ENST00000510977 541 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 RNU6-123P-201ENST00000516163 102 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 RNU6-1016P-201ENST00000516689 94 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AC023442.1-201ENST00000531247 422 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AC110588.1-201ENST00000559699 137 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AL136131.3-201ENST00000607600 188 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AC073592.6-201ENST00000624271 415 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 AC073593.1-201ENST00000624500 411 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.84□□□□□ -1.63
SHISA3A0PJX4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHISA3A0PJX4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.84□□□□□ -1.64
SHISA3A0PJX4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.84□□□□□ -1.64
SHISA3A0PJX4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
SHISA3A0PJX4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SHISA3A0PJX4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.84□□□□□ -1.64
SHISA3A0PJX4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms