Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL591623.2-201ENST00000449978 222 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 EIF4A1P11-201ENST00000451239 222 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AC108059.3-201ENST00000456388 214 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AL445687.2-201ENST00000458156 728 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 RN7SL817P-201ENST00000480777 288 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 ATP5LP5-201ENST00000483050 299 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 Y_RNA.661-201ENST00000516003 99 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 RN7SKP288-201ENST00000516227 268 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AC127381.1-201ENST00000555979 939 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 MIR4504-201ENST00000577413 92 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AC068790.4-201ENST00000602474 263 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AL512782.1-201ENST00000603093 364 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 RPL23AP92-201ENST00000603609 255 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AL670379.11-201ENST00000604059 253 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AL670379.10-201ENST00000604330 253 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AL670379.12-201ENST00000605291 253 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AL670379.9-201ENST00000605428 253 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AC010424.2-201ENST00000607594 443 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AL049794.2-201ENST00000616301 365 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AL442639.1-201ENST00000625030 1899 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AC093849.1-201ENST00000563631 2209 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 SNURFL-201ENST00000309296 343 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 RNA5SP258-201ENST00000362750 119 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 Y_RNA.135-201ENST00000363439 95 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 SNORD3H-201ENST00000384486 214 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 RNU11-201ENST00000387069 134 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AL133388.1-201ENST00000404509 287 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 DNAJC19P7-201ENST00000428811 344 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AF228730.2-201ENST00000438784 848 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AC006511.1-201ENST00000470614 315 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AC093767.1-201ENST00000504523 156 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 HMGN1P9-201ENST00000515212 298 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 RNU6-256P-201ENST00000516747 97 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 DEFB109D-201ENST00000529497 240 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AC026470.2-201ENST00000561492 181 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 ATP5J2P6-201ENST00000565203 266 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AC138761.3-201ENST00000579993 334 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 MIR4270-201ENST00000581799 70 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 MIR5096-201ENST00000583713 70 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 MIR4737-201ENST00000583979 81 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 BNIP3P16-201ENST00000589779 534 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AL513327.3-201ENST00000602618 469 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AL360012.1-201ENST00000602813 131 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AC008782.1-201ENST00000603386 430 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 NANOGP3-201ENST00000605855 286 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 Z82243.1-201ENST00000609432 473 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AC093799.2-201ENST00000610062 578 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 HMGB1P24-202ENST00000615653 685 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AC007485.1-201ENST00000616755 206 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 uc_338.11-201ENST00000619132 160 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 AL162373.1-201ENST00000620433 407 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 SMG1P6-201ENST00000532337 2930 ntBASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ZC3H4Q9UPT8 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.65□□□□□ -1.34
ZC3H4Q9UPT8 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
ZC3H4Q9UPT8 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms