Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 TRAV8-5-201ENST00000537369 341 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC006064.5-201ENST00000541782 248 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 OR6C7P-201ENST00000547875 934 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC107016.1-201ENST00000550463 337 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 HMGB3P26-201ENST00000560051 582 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 MIR4286-201ENST00000580651 93 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC008507.1-201ENST00000587506 734 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC078795.2-201ENST00000602835 1252 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC115621.1-201ENST00000604653 858 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC069304.2-201ENST00000605154 435 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AL031775.1-201ENST00000607014 887 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AL392088.2-201ENST00000637607 285 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 NOL8P1-201ENST00000508336 3529 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.21□□□□□ -1.73
NCKIPSDQ9NZQ3 AL356473.1-201ENST00000406203 1408 ntBASIC4.21□□□□□ -1.73
NCKIPSDQ9NZQ3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.21□□□□□ -1.73
NCKIPSDQ9NZQ3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
NCKIPSDQ9NZQ3 AC090229.1-201ENST00000590983 1609 ntBASIC4.21□□□□□ -1.73
NCKIPSDQ9NZQ3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 SNORA37-201ENST00000384504 129 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 HSPD1P16-201ENST00000402302 394 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 MIR1179-201ENST00000408703 91 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 RN7SKP142-201ENST00000411236 328 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 MTCO3P41-201ENST00000414801 328 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 MTCO2P34-201ENST00000421994 607 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 RPL23AP89-201ENST00000439324 255 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 RPL39P6-201ENST00000448289 150 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AC104073.1-201ENST00000451988 151 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 RPL23AP81-201ENST00000455252 467 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 RPL18AP17-201ENST00000455326 198 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AC072039.1-201ENST00000477611 581 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 RN7SL132P-201ENST00000478131 296 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 CBX3P3-201ENST00000508108 532 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 RNU6-583P-201ENST00000516012 92 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 RNA5SP73-201ENST00000516744 108 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 CENPUP2-201ENST00000555897 1186 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 MIR3611-201ENST00000584484 83 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AC022916.3-201ENST00000592961 742 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AL354984.3-201ENST00000604803 325 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AL021997.1-201ENST00000605757 193 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AC092354.1-201ENST00000606057 376 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 RNU4-89P-201ENST00000607443 133 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AL513477.2-201ENST00000607858 568 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AC099669.2-201ENST00000616549 437 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 MIR6715B-201ENST00000637172 77 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 AC027287.1-201ENST00000553115 1453 ntBASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.21□□□□□ -1.74
NCKIPSDQ9NZQ3 Z73965.1-201ENST00000623412 2297 ntBASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 RNU1-14P-201ENST00000362759 152 ntBASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 RNU6-374P-201ENST00000364146 108 ntBASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 RNU6-660P-201ENST00000364566 109 ntBASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 SNORA51.6-201ENST00000384151 125 ntBASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 SNORA70E-201ENST00000384492 135 ntBASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 MIR153-1-201ENST00000384914 90 ntBASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 AC025750.1-201ENST00000399891 379 ntBASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 USP9YP33-201ENST00000412220 421 ntBASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 JKAMPP1-201ENST00000413804 919 ntBASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 Z99497.1-201ENST00000421282 135 ntBASIC4.2□□□□□ -1.74
NCKIPSDQ9NZQ3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms