Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 AC073410.1-201ENST00000435125 589 ntBASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 AL353752.1-201ENST00000454946 260 ntBASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 AC005008.1-201ENST00000456151 612 ntBASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 RPL36AP13-201ENST00000457490 317 ntBASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 HMGB3P30-201ENST00000457863 606 ntBASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 SNORD5.1-201ENST00000458800 75 ntBASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 SNORD97-201ENST00000459187 142 ntBASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 TRBV5-2-201ENST00000489095 273 ntBASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 RN7SKP40-201ENST00000517211 242 ntBASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 AC009570.1-201ENST00000609599 745 ntBASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 AC007159.1-201ENST00000566529 4706 ntBASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 AL355834.1-201ENST00000556602 3965 ntBASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 SAMMSON-210ENST00000641260 1308 ntBASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NEUROD4Q9HD90 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 RNU6-1059P-201ENST00000363752 98 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 RNU6-1078P-201ENST00000364522 103 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 Y_RNA.399-201ENST00000383955 105 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 Y_RNA.552-201ENST00000384665 112 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 RN7SKP159-201ENST00000410657 292 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 RNU6-387P-201ENST00000411331 105 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 RPLP0P7-201ENST00000416050 667 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 RPL12P12-201ENST00000424633 501 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AC130360.1-201ENST00000425489 1117 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AL360081.1-201ENST00000428299 555 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 HMGB3P24-201ENST00000433260 622 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 RPS20P1-201ENST00000434853 354 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AL445928.1-201ENST00000435545 222 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 CYCSP24-201ENST00000445119 316 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AC009963.3-201ENST00000458090 486 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 RPS3AP41-201ENST00000462701 778 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AC008571.1-201ENST00000467232 300 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AP001086.1-201ENST00000494882 321 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AC104109.1-201ENST00000498563 436 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 HMGB3P17-201ENST00000504195 649 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 VN1R104P-201ENST00000505115 1009 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 MTND1P19-201ENST00000511780 315 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 SNORD116-26-201ENST00000516006 96 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AC012400.1-201ENST00000518452 381 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AC131281.1-201ENST00000522984 164 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AC130365.2-201ENST00000525882 1201 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AL355297.3-201ENST00000604082 446 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AL021879.1-201ENST00000611756 288 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 AC091925.2-201ENST00000625059 256 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 SOCS5P3-201ENST00000425115 1576 ntBASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.7□□□□□ -1.5
NEUROD4Q9HD90 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NEUROD4Q9HD90 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NEUROD4Q9HD90 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NEUROD4Q9HD90 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NEUROD4Q9HD90 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NEUROD4Q9HD90 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.69□□□□□ -1.5
NEUROD4Q9HD90 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms