Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 KLRA1P-201ENST00000503499 986 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AC118942.1-201ENST00000529674 1035 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AC087481.2-201ENST00000565492 330 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AC012182.1-201ENST00000570133 895 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AL022067.1-201ENST00000602426 454 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AC073387.2-201ENST00000604797 784 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AC024060.1-201ENST00000607052 494 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AL049777.1-201ENST00000622740 518 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 AP001148.1-201ENST00000624124 2359 ntBASIC3.56□□□□□ -1.84
DDX47Q9H0S4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
DDX47Q9H0S4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.55□□□□□ -1.84
DDX47Q9H0S4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
DDX47Q9H0S4 GDI2P1-201ENST00000429312 1336 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 SNORD56.3-201ENST00000363507 71 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 RN7SKP280-201ENST00000364196 304 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 RNU6-1176P-201ENST00000390955 107 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 ARF4P3-201ENST00000397387 509 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX47Q9H0S4 CRYBB2P1-203ENST00000415709 538 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 AC245291.1-201ENST00000419501 328 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 ISCA1P2-201ENST00000438679 421 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 HMGB3P11-201ENST00000440127 604 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 AC125238.1-201ENST00000448842 249 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 FTH1P2-201ENST00000466086 412 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.55□□□□□ -1.84
DDX47Q9H0S4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX47Q9H0S4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX47Q9H0S4 AP001189.2-201ENST00000527320 189 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 AL121603.1-201ENST00000553815 142 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 LARP7P2-201ENST00000575306 125 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX47Q9H0S4 AC112220.2-201ENST00000605513 533 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 AP001521.1-201ENST00000609150 300 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 AC231759.1-201ENST00000616455 597 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 AC018755.4-201ENST00000619715 454 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 AC104985.3-201ENST00000623479 597 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX47Q9H0S4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX47Q9H0S4 ZNF663P-202ENST00000641770 1131 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 MFSD8-233ENST00000641482 4860 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
DDX47Q9H0S4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX47Q9H0S4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 AC244517.1-201ENST00000606030 2086 ntBASIC3.55□□□□□ -1.84
DDX47Q9H0S4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AC004925.1-201ENST00000624256 2706 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AP005901.5-201ENST00000545779 1796 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 RNU1-64P-201ENST00000365443 163 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AL445189.1-201ENST00000405722 338 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 RPL23AP47-201ENST00000408017 460 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 RNU2-71P-201ENST00000411395 189 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 GTF2IP7-202ENST00000436677 309 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 HMGB1P12-201ENST00000438594 598 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 HMGB1P25-201ENST00000468402 607 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AC104982.1-201ENST00000478775 574 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AL024509.2-201ENST00000493462 493 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 SYF2P1-201ENST00000550658 413 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AC037471.2-201ENST00000564941 598 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AC138915.2-201ENST00000569776 97 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AC005014.3-201ENST00000605985 190 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AC090425.2-201ENST00000608818 501 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AL159169.3-201ENST00000608871 561 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AC090912.3-201ENST00000609775 533 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AC006023.2-201ENST00000609916 167 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 MIR8058-201ENST00000615737 89 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 MKKS-204ENST00000639674 192 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 MTCO1P23-201ENST00000415223 1526 ntBASIC3.54□□□□□ -1.84
DDX47Q9H0S4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX47Q9H0S4 AL365440.1-201ENST00000436135 2167 ntBASIC3.53□□□□□ -1.84
DDX47Q9H0S4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.53□□□□□ -1.84
DDX47Q9H0S4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
DDX47Q9H0S4 SRP72P2-201ENST00000344851 1979 ntBASIC3.53□□□□□ -1.84
DDX47Q9H0S4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.53□□□□□ -1.84
DDX47Q9H0S4 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
DDX47Q9H0S4 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms