Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC007458.1-201ENST00000542812 373 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 MIR4429-201ENST00000580105 73 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AP005229.2-201ENST00000609980 697 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 VIS1.1-201ENST00000610517 203 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AC040168.1-201ENST00000623594 991 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AC127502.3-201ENST00000636170 1206 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 SNORA40.4-201ENST00000390971 128 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 SNORA48.8-201ENST00000391324 134 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 RPL22P22-201ENST00000395439 379 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 RNU6-712P-201ENST00000410558 100 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 RNU6-55P-201ENST00000411092 107 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 RNU6-954P-201ENST00000411355 107 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AL356968.1-201ENST00000416622 474 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 FO393414.1-201ENST00000428697 1184 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 CYCSP35-201ENST00000451978 304 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 PLGLA-201ENST00000465668 449 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AC021205.2-201ENST00000480069 347 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AC093663.1-201ENST00000497190 394 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 MTCYBP37-201ENST00000510642 1133 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 OR4P1P-201ENST00000530808 1136 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AP001542.2-201ENST00000593141 364 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AL109653.1-201ENST00000603091 248 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AL159169.3-201ENST00000608871 561 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AC015967.1-201ENST00000619893 476 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AC095031.1-201ENST00000623685 672 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AL512506.2-201ENST00000624472 458 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 OR8B1P-202ENST00000641132 1178 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 ZNF663P-202ENST00000641770 1131 ntBASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
POLR1EQ9GZS1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 DBF4P1-201ENST00000412976 1892 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AC002546.1-201ENST00000588041 2504 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AC058791.1-201ENST00000608412 3198 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 MTCO1P12-201ENST00000414273 1543 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 CR383658.2-201ENST00000547576 1525 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 RNU6-582P-201ENST00000362989 107 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 MIR490-201ENST00000384865 128 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 HSFY4P-201ENST00000415994 1181 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 SFR1P2-201ENST00000421841 730 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AL512637.2-201ENST00000431287 1256 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AC005345.1-201ENST00000431868 217 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AC005019.1-201ENST00000436455 431 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 RABEPKP1-201ENST00000440529 1026 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 TXNP1-201ENST00000441872 371 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 RPL17P49-201ENST00000443728 411 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AL096829.2-201ENST00000446582 742 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 PABPC1P3-201ENST00000469174 459 ntBASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.41□□□□□ -1.86
POLR1EQ9GZS1 RNU6-885P-201ENST00000516607 104 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms