Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 AL355578.1-201ENST00000607405 1328 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 RNU4-47P-201ENST00000410876 114 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AC073264.1-201ENST00000411508 416 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AC093392.2-201ENST00000450682 337 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AL445669.2-201ENST00000454425 421 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 HMGB1P25-201ENST00000468402 607 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AC017015.1-201ENST00000477387 286 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AC105914.1-201ENST00000511798 226 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AC133963.2-201ENST00000513686 578 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 TRAV11-201ENST00000539512 339 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 CR383656.14-201ENST00000551951 406 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 MTCO3P24-201ENST00000572729 782 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AC022387.2-201ENST00000604050 448 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AL020991.1-201ENST00000612314 373 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AC100793.4-201ENST00000613683 429 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 AC010338.1-201ENST00000621823 717 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 MTND4P8-201ENST00000514997 1362 ntBASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
CDCA4Q9BXL8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
CDCA4Q9BXL8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AC046144.1-201ENST00000478559 1853 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 ZNF807-201ENST00000328088 1707 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AC073325.2-201ENST00000339545 159 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 MIR142-201ENST00000384835 87 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 MIR491-201ENST00000384877 84 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 MIR23A-201ENST00000385245 73 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 RPL7P25-201ENST00000404151 721 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AL031121.1-201ENST00000406553 254 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 Z86062.1-201ENST00000406773 777 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 RNA5SP120-201ENST00000410900 112 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 MRPL50P2-201ENST00000416821 482 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 YPEL5P1-201ENST00000419731 367 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 OFD1P18Y-201ENST00000420889 959 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AC005300.1-201ENST00000428401 373 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AC005326.1-201ENST00000429197 123 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AC006028.1-201ENST00000438379 402 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 RPL39P40-201ENST00000445481 146 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 BX510359.1-201ENST00000456973 237 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 snoU13.4-201ENST00000458916 104 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AC010301.1-201ENST00000473936 355 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AC090543.1-201ENST00000492168 485 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 DYNLL1P6-201ENST00000503440 264 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AC026427.2-201ENST00000506228 536 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 CBX3P2-202ENST00000583365 535 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AC079610.2-201ENST00000604818 690 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AL442067.2-201ENST00000614033 363 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AC018755.4-201ENST00000619715 454 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AC022509.4-201ENST00000621404 572 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 ZNF734P-201ENST00000419494 1534 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 AC092447.7-201ENST00000422212 1621 ntBASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.71□□□□□ -1.98
CDCA4Q9BXL8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms