Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 AC138915.2-201ENST00000569776 97 ntBASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 MTCO3P24-201ENST00000572729 782 ntBASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 MIR3912-201ENST00000577566 105 ntBASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 MIR3138-201ENST00000585238 82 ntBASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 AL606490.9-201ENST00000603331 271 ntBASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 AL445423.1-201ENST00000609941 536 ntBASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 MIR6798-201ENST00000612887 67 ntBASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 AC073968.1-201ENST00000618594 637 ntBASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 AP000346.3-201ENST00000622821 210 ntBASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 AC068787.1-201ENST00000623908 691 ntBASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 LINC02211-204ENST00000642024 1070 ntBASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 AC002546.1-201ENST00000588041 2504 ntBASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC71LQ8N9Z2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 MIR30E-201ENST00000362104 92 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AP002088.1-201ENST00000382740 395 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 RNU6-1181P-201ENST00000384191 106 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 SNORA40.2-201ENST00000390847 128 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AL136310.1-201ENST00000404926 654 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 RNU2-42P-201ENST00000410697 113 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 RNA5SP107-201ENST00000411358 122 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC093578.1-201ENST00000415219 368 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 SDCBPP2-201ENST00000424643 885 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 RPL17P49-201ENST00000443728 411 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 H2AFZP6-201ENST00000444403 394 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 RPS4XP2-201ENST00000458402 793 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 OR9M1P-201ENST00000459641 921 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC084357.1-201ENST00000473404 255 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC007686.1-201ENST00000488511 463 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC134050.1-201ENST00000495088 933 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 OR5H5P-201ENST00000503164 928 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC093767.1-201ENST00000504523 156 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC010460.2-201ENST00000509054 677 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 RNU1-61P-201ENST00000516107 151 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 MRPL49P2-201ENST00000521066 465 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AP006245.1-201ENST00000522549 120 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 ARL2BPP5-201ENST00000523141 481 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AP003385.6-201ENST00000531603 374 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC137768.1-201ENST00000549998 553 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC023813.2-201ENST00000564321 469 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AGGF1P5-201ENST00000567900 919 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 LARP7P2-201ENST00000575306 125 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 MTND3P19-201ENST00000603825 345 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC026790.2-201ENST00000606282 430 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC034229.4-201ENST00000607861 441 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC004832.5-201ENST00000608677 401 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC008083.4-201ENST00000615076 444 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC009318.4-201ENST00000620496 486 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AP003355.3-201ENST00000623465 114 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 AC112484.5-201ENST00000624189 228 ntBASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC71LQ8N9Z2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.93
CCDC71LQ8N9Z2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 AC099786.3-201ENST00000565735 1410 ntBASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 SNORA51.6-201ENST00000384151 125 ntBASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 RNU6-1242P-201ENST00000391052 103 ntBASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 CYB5AP4-201ENST00000396692 399 ntBASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 AL161449.1-201ENST00000414531 1199 ntBASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 SSR1P2-201ENST00000415208 787 ntBASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 AC245291.1-201ENST00000419501 328 ntBASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 GLRXP1-201ENST00000423261 334 ntBASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 MTND2P5-201ENST00000432656 1006 ntBASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 GTF2IP7-202ENST00000436677 309 ntBASIC2.96□□□□□ -1.94
CCDC71LQ8N9Z2 TRIM60P18-201ENST00000441518 828 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms