Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 AC233982.1-201ENST00000451247 436 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 BX276092.4-201ENST00000452056 248 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 RPS26P21-201ENST00000475397 348 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 HMGN2P13-201ENST00000476476 274 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 RN7SL283P-201ENST00000489055 303 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 HIGD1AP3-201ENST00000515857 278 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 AP003049.1-201ENST00000529418 457 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 AC004217.3-201ENST00000551552 878 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 EIF5A2P1-201ENST00000564027 460 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 AC005412.1-201ENST00000580812 1049 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 AL390240.1-201ENST00000612950 384 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 AC100793.4-201ENST00000613683 429 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 MIR7112-201ENST00000616126 65 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 AC244100.1-202ENST00000621554 382 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 AC018692.3-201ENST00000623929 123 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AC004972.1-201ENST00000623934 2209 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 MIR16-2-201ENST00000362117 81 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 U3.6-201ENST00000363622 211 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 SNORA7.4-201ENST00000384249 137 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 SNORD15B-201ENST00000384714 146 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 RNA5SP171-201ENST00000391071 115 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 RNU1-101P-201ENST00000391171 127 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AC110754.1-201ENST00000399740 601 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 BTBD10P2-201ENST00000404779 676 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AL031121.1-201ENST00000406553 254 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 BX664727.1-201ENST00000416024 466 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 HSPE1P1-201ENST00000421494 318 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AL389915.1-201ENST00000422463 466 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 RPL7P55-201ENST00000450522 746 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 GTF2IP12-201ENST00000456547 356 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 RPL7L1P13-201ENST00000511702 739 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 RNU6-416P-201ENST00000516265 103 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AP003717.3-201ENST00000544832 1180 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 MTCO3P24-201ENST00000572729 782 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AC133794.1-201ENST00000602731 914 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 PRELID3BP8-201ENST00000604148 295 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AC099506.2-201ENST00000623074 221 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AC025263.3-201ENST00000622965 1396 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 AC092435.3-201ENST00000565538 3654 ntBASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC65Q8IXS2 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 RNU6-1243P-201ENST00000364028 107 ntBASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 SNORA51.12-201ENST00000384448 134 ntBASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 RNU6-1151P-201ENST00000384684 107 ntBASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 UBE2D3P3-201ENST00000426992 425 ntBASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 RPL36P19-201ENST00000430744 301 ntBASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 RPL23AP33-201ENST00000442301 452 ntBASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 AL929288.2-201ENST00000446368 407 ntBASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 AC005002.1-201ENST00000447458 540 ntBASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 BX248409.1-201ENST00000455497 255 ntBASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 RN7SL807P-201ENST00000470923 297 ntBASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 AL358832.1-201ENST00000497800 389 ntBASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC65Q8IXS2 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms