Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.38□□□□□ -1.87
USP50Q70EL3 MIR607-201ENST00000385241 96 ntBASIC3.38□□□□□ -1.87
USP50Q70EL3 RPL23AP47-201ENST00000408017 460 ntBASIC3.38□□□□□ -1.87
USP50Q70EL3 U3.42-201ENST00000408746 214 ntBASIC3.38□□□□□ -1.87
USP50Q70EL3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
USP50Q70EL3 AC004022.2-201ENST00000413824 193 ntBASIC3.38□□□□□ -1.87
USP50Q70EL3 MTND2P16-201ENST00000419987 799 ntBASIC3.38□□□□□ -1.87
USP50Q70EL3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.38□□□□□ -1.87
USP50Q70EL3 AL355994.1-201ENST00000424379 260 ntBASIC3.38□□□□□ -1.87
USP50Q70EL3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.38□□□□□ -1.87
USP50Q70EL3 AL627224.1-201ENST00000448334 444 ntBASIC3.38□□□□□ -1.87
USP50Q70EL3 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.38□□□□□ -1.87
USP50Q70EL3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.38□□□□□ -1.87
USP50Q70EL3 ATG10-AS1-201ENST00000504846 648 ntBASIC3.38□□□□□ -1.87
USP50Q70EL3 ANXA2P1-201ENST00000505539 926 ntBASIC3.38□□□□□ -1.87
USP50Q70EL3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.38□□□□□ -1.87
USP50Q70EL3 RNA5SP148-201ENST00000516527 94 ntBASIC3.38□□□□□ -1.87
USP50Q70EL3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
USP50Q70EL3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.38□□□□□ -1.87
USP50Q70EL3 AC006023.2-201ENST00000609916 167 ntBASIC3.38□□□□□ -1.87
USP50Q70EL3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
USP50Q70EL3 MAPK10-362ENST00000641864 4484 ntBASIC3.38□□□□□ -1.87
USP50Q70EL3 ZNF658B-202ENST00000615961 3375 ntBASIC3.38□□□□□ -1.87
USP50Q70EL3 AL353746.1-201ENST00000566293 6881 ntBASIC3.38□□□□□ -1.87
USP50Q70EL3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.38□□□□□ -1.87
USP50Q70EL3 AC117529.2-201ENST00000512159 2068 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.37□□□□□ -1.87
USP50Q70EL3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
USP50Q70EL3 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP50Q70EL3 SNORA51.2-201ENST00000364595 132 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 RNU6-185P-201ENST00000384421 107 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 EIF5P1-201ENST00000400019 1231 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 SNORA3.2-201ENST00000408221 125 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 AL513477.1-202ENST00000417061 214 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.37□□□□□ -1.87
USP50Q70EL3 RPL31P12-201ENST00000422587 358 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 Z85994.2-201ENST00000434327 452 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.37□□□□□ -1.87
USP50Q70EL3 WASF1P1-201ENST00000447560 1131 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 NPM1P49-201ENST00000448027 714 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 HMGB1P26-201ENST00000452520 628 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.37□□□□□ -1.87
USP50Q70EL3 AC091179.1-201ENST00000461606 579 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP50Q70EL3 ST13P14-201ENST00000474095 734 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 AC021087.2-201ENST00000504656 1203 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.37□□□□□ -1.87
USP50Q70EL3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.37□□□□□ -1.87
USP50Q70EL3 AC147055.1-201ENST00000509261 750 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP50Q70EL3 TMEM248P1-201ENST00000510579 951 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 AC008837.1-201ENST00000511513 412 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.37□□□□□ -1.87
USP50Q70EL3 AC010198.2-201ENST00000550612 259 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 MIR4474-201ENST00000579189 78 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.37□□□□□ -1.87
USP50Q70EL3 AC098826.3-201ENST00000603823 466 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 AC090525.3-201ENST00000605601 189 ntBASIC3.37□□□□□ -1.87
USP50Q70EL3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.37□□□□□ -1.87
USP50Q70EL3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.37□□□□□ -1.87
USP50Q70EL3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.37□□□□□ -1.87
USP50Q70EL3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.37□□□□□ -1.87
USP50Q70EL3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP50Q70EL3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
USP50Q70EL3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP50Q70EL3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.37□□□□□ -1.87
USP50Q70EL3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
USP50Q70EL3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP50Q70EL3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP50Q70EL3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.36□□□□□ -1.87
USP50Q70EL3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP50Q70EL3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USP50Q70EL3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USP50Q70EL3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
USP50Q70EL3 RNA5SP274-201ENST00000410484 108 ntBASIC3.36□□□□□ -1.87
USP50Q70EL3 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.36□□□□□ -1.87
USP50Q70EL3 EI24P1-201ENST00000416584 867 ntBASIC3.36□□□□□ -1.87
USP50Q70EL3 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USP50Q70EL3 AC233981.1-201ENST00000423224 461 ntBASIC3.36□□□□□ -1.87
USP50Q70EL3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USP50Q70EL3 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.36□□□□□ -1.87
USP50Q70EL3 UBE2D3P1-201ENST00000436669 444 ntBASIC3.36□□□□□ -1.87
USP50Q70EL3 AL662791.1-201ENST00000441992 928 ntBASIC3.36□□□□□ -1.87
USP50Q70EL3 RPS20P22-201ENST00000473700 357 ntBASIC3.36□□□□□ -1.87
USP50Q70EL3 AC012181.1-201ENST00000479895 423 ntBASIC3.36□□□□□ -1.87
USP50Q70EL3 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.36□□□□□ -1.87
USP50Q70EL3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.36□□□□□ -1.87
USP50Q70EL3 MIR548Y-201ENST00000582739 110 ntBASIC3.36□□□□□ -1.87
USP50Q70EL3 AL158827.2-201ENST00000602494 330 ntBASIC3.36□□□□□ -1.87
USP50Q70EL3 AL691447.3-201ENST00000635020 330 ntBASIC3.36□□□□□ -1.87
USP50Q70EL3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.36□□□□□ -1.87
USP50Q70EL3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
USP50Q70EL3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USP50Q70EL3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP50Q70EL3 AL136164.4-201ENST00000625013 2135 ntBASIC3.35□□□□□ -1.87
USP50Q70EL3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP50Q70EL3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
USP50Q70EL3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms