Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AC010300.1-201ENST00000600671 5134 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 NUP58P1-201ENST00000502546 1738 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AC025031.4-201ENST00000621248 3271 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 ELOCP19-201ENST00000411919 318 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 EIF1P1-201ENST00000421436 341 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 RPL7AP25-201ENST00000423357 805 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 PSMA6P3-201ENST00000428242 164 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 EZH2P1-201ENST00000431167 291 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AC073614.1-201ENST00000438690 650 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 SDCBPP1-201ENST00000440192 890 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 MTND6P13-201ENST00000443510 523 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 FAM103A2P-201ENST00000444122 354 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 RPL23AP43-201ENST00000446445 471 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AC093392.2-201ENST00000450682 337 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 BX276092.4-201ENST00000452056 248 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 HMGB1P15-201ENST00000453854 435 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 RPS23P7-201ENST00000466210 444 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 RN7SL817P-201ENST00000480777 288 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 NDUFB4P2-201ENST00000509515 391 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AC091133.4-201ENST00000511142 308 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AC093853.1-201ENST00000515689 483 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 RNU6-1178P-201ENST00000516674 107 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 RN7SKP277-201ENST00000516895 283 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 IGLVIV-65-201ENST00000517313 360 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 MTCO2P4-201ENST00000517968 247 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 IGLVIV-53-201ENST00000520107 367 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 OR5BC1P-201ENST00000529327 739 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 RPL21P5-201ENST00000554662 472 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AL121834.1-201ENST00000572284 509 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AC067852.4-201ENST00000590314 478 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AC010201.1-201ENST00000605051 540 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AL356218.2-201ENST00000605264 187 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AC091979.2-201ENST00000607514 214 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AC072046.2-201ENST00000618366 268 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AP005019.3-201ENST00000620418 560 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AL160394.1-201ENST00000624765 724 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AC099654.13-201ENST00000639774 207 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 OR56B2P-202ENST00000641377 2453 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.36□□□□□ -1.71
PTCHD3Q3KNS1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 FARSBP1-201ENST00000435808 1778 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 SNORD82-201ENST00000365530 70 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 MTND4LP20-201ENST00000402379 270 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 RNU4-25P-201ENST00000410569 230 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 RN7SKP167-201ENST00000411047 285 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AL592293.2-201ENST00000422292 996 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 CHIAP3-201ENST00000423668 1133 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC007742.1-201ENST00000425789 329 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 ISCA1P1-201ENST00000426679 387 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AL035410.1-201ENST00000427409 427 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC092017.2-201ENST00000427600 362 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 ELOCP26-201ENST00000436067 329 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 CBX1P1-201ENST00000440184 427 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms