Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 RPL7P26-201ENST00000333817 754 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 SNORA54-201ENST00000384281 123 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 MCTS2P-201ENST00000394552 546 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 AC126124.2-201ENST00000413542 321 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 YWHAZP8-201ENST00000436935 731 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 AC000041.1-201ENST00000439655 175 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 AL831737.1-201ENST00000441288 271 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 OR51B8P-201ENST00000449892 769 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 HMGN2P16-201ENST00000456802 261 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 RNU7-140P-201ENST00000459546 60 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 SNORA70.19-201ENST00000516717 90 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 AL163153.1-201ENST00000554223 283 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 NIFKP8-201ENST00000560500 874 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 AL845331.3-202ENST00000562856 261 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 CYP2C60P-201ENST00000566088 139 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 AL136370.1-201ENST00000608166 691 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 AL356321.1-201ENST00000621360 228 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 AC092608.3-201ENST00000625017 386 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 AC073055.1-201ENST00000456901 1621 ntBASIC3.81□□□□□ -1.8
SHROOM1Q2M3G4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 ZNF37BP-203ENST00000452306 1352 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 RNU5B-1-201ENST00000363286 116 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 SNORA44-201ENST00000384584 132 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AL035405.1-201ENST00000400795 710 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 SNORA11.2-201ENST00000408318 127 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 RNU4-65P-201ENST00000410473 140 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC092638.1-201ENST00000411966 1275 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC007899.1-201ENST00000412776 775 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 TAF13P2-201ENST00000416876 286 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC008264.1-201ENST00000447612 367 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC233982.1-201ENST00000451247 436 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 RPS17P11-201ENST00000474297 293 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC109925.1-201ENST00000478069 331 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC015724.1-201ENST00000478577 156 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC096576.1-201ENST00000489014 359 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC110794.1-201ENST00000505816 425 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC008885.2-201ENST00000509506 930 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC008885.1-201ENST00000514930 301 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 RNU6-416P-201ENST00000516265 103 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 NARSP2-201ENST00000518524 679 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 HMGB1P1-201ENST00000522557 636 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 MTCYBP28-201ENST00000566728 1132 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC013468.1-201ENST00000608680 598 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AL590282.1-201ENST00000610379 1136 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 AC018692.3-201ENST00000623929 123 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 MAPK10-362ENST00000641864 4484 ntBASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
SHROOM1Q2M3G4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SHROOM1Q2M3G4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHROOM1Q2M3G4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.79□□□□□ -1.8
SHROOM1Q2M3G4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
SHROOM1Q2M3G4 MIR422A-201ENST00000362286 90 ntBASIC3.79□□□□□ -1.8
SHROOM1Q2M3G4 RNU6-50P-201ENST00000362356 103 ntBASIC3.79□□□□□ -1.8
SHROOM1Q2M3G4 RPL31P1-201ENST00000398116 372 ntBASIC3.79□□□□□ -1.8
SHROOM1Q2M3G4 RNU6-77P-201ENST00000410554 91 ntBASIC3.79□□□□□ -1.8
SHROOM1Q2M3G4 AL356968.1-201ENST00000416622 474 ntBASIC3.79□□□□□ -1.8
SHROOM1Q2M3G4 AL158071.1-201ENST00000430315 461 ntBASIC3.79□□□□□ -1.8
SHROOM1Q2M3G4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.79□□□□□ -1.8
SHROOM1Q2M3G4 FABP5P3-201ENST00000437960 408 ntBASIC3.79□□□□□ -1.8
SHROOM1Q2M3G4 AC025750.2-201ENST00000442609 450 ntBASIC3.79□□□□□ -1.8
SHROOM1Q2M3G4 RPL7P52-201ENST00000449200 742 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms